RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 TTC17Q96AE7 1141 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 LMLNQ96KR4 655 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 GDAP1L1Q96MZ0 367 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 SEMA3CQ99985 751 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 P2RY13Q9BPV8 354 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 HINFPQ9BQA5 517 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 FSD1LQ9BXM9 530 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 EPC1Q9H2F5 836 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 PRDM6Q9NQX0 595 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 GDF3Q9NR23 364 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 INTS6Q9UL03 887 aaKnown RBP8.54□□□□□ -1.04
RBM39-208ENST00000416108 PLA2G4CQ9UP65 541 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 ERVW-1Q9UQF0 538 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 ATP8A1Q9Y2Q0 1164 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
RBM39-208ENST00000416108 NEU2Q9Y3R4 380 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 FARP1Q9Y4F1 1045 aaPredicted RBP8.54□□□□□ -1.04
RBM39-208ENST00000416108 PIAS3Q9Y6X2 628 aa8.54□□□□□ -1.04
RBM39-208ENST00000416108 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 OTOL1A6NHN0 477 aaPredicted RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 ERI2A8K979 691 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 LOC730098B7Z3J9 87 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 ARNTLO00327 626 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TRIM24O15164 1050 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 BNIP3LO60238 219 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SEC31AO94979 1220 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 METTL18O95568 372 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 PEX11BO96011 259 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 APRTP07741 180 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SERPINF2P08697 491 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 DLDP09622 509 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 SRCP12931 536 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 GLULP15104 373 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TPSB2P20231 275 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TNFRSF8P28908 595 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 CTHP32929 405 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 MAPK8P45983 427 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SOX9P48436 509 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 STK19P49842 368 aaPredicted RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 SCNN1BP51168 640 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 PLTPP55058 493 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 DSC2Q02487 901 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 MPP3Q13368 585 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SEMA5AQ13591 1074 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 CYTH1Q15438 398 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TPSAB1Q15661 275 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 GAB4Q2WGN9 574 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 RALGPS1Q5JS13 557 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 NAPEPLDQ6IQ20 393 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 WDR93Q6P2C0 686 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 C22orf39Q6P5X5 142 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 KIAA0907Q7Z7F0 614 aaPredicted RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 ADIPOR2Q86V24 386 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SH2D3CQ8N5H7 860 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 PCDH20Q8N6Y1 951 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 IPMKQ8NFU5 416 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 CYB5D2Q8WUJ1 264 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 EXOC2Q96KP1 924 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 RPL10LQ96L21 214 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 PSKH2Q96QS6 385 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 FCRL5Q96RD9 977 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 MGME1Q9BQP7 344 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 FRMD8Q9BZ67 464 aaPredicted RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TM6SF2Q9BZW4 377 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 TSPYL1Q9H0U9 437 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SLC25A51Q9H1U9 297 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 LRRC40Q9H9A6 602 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 EIF2B3Q9NR50 452 aaKnown RBP8.53□□□□□ -1.04
RBM39-208ENST00000416108 HEBP1Q9NRV9 189 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 ELOVL2Q9NXB9 296 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 FAM153AQ9UHL3 310 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SORCS3Q9UPU3 1222 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 HS3ST2Q9Y278 367 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 ACTL7AQ9Y615 435 aa8.53□□□□□ -1.04
RBM39-208ENST00000416108 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 AP3B1O00203 1094 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 MAN2B1O00754 1011 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 NPC1O15118 1278 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 NARSO43776 548 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 PMPCBO75439 489 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 GSRP00390 522 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 DRD1P21728 446 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 CD68P34810 354 aaPredicted RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 CD86P42081 329 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 GALK1P51570 392 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 ARL4CP56559 192 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 AP1S1P61966 158 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 VSNL1P62760 191 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 CDK16Q00536 496 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 ZP2Q05996 745 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 NSUN2Q08J23 767 aaKnown RBP eCLIP8.52□□□□□ -1.05
RBM39-208ENST00000416108 GRSF1Q12849 480 aaKnown RBP eCLIP8.52□□□□□ -1.05
RBM39-208ENST00000416108 KCNJ11Q14654 390 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms