RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 CERS4Q9HA82 394 aa8.8□□□□□ -1
MECP2-204ENST00000415944 TMEM248Q9NWD8 314 aa8.8□□□□□ -1
MECP2-204ENST00000415944 DNAJC28Q9NX36 388 aa8.8□□□□□ -1
MECP2-204ENST00000415944 NOP53Q9NZM5 478 aaKnown RBP8.8□□□□□ -1
MECP2-204ENST00000415944 SEPT10Q9P0V9 454 aa8.8□□□□□ -1
MECP2-204ENST00000415944 VTI1BQ9UEU0 232 aa8.8□□□□□ -1
MECP2-204ENST00000415944 BCAP29Q9UHQ4 241 aa8.8□□□□□ -1
MECP2-204ENST00000415944 TRIM33Q9UPN9 1127 aa8.8□□□□□ -1
MECP2-204ENST00000415944 CHKBQ9Y259 395 aa8.8□□□□□ -1
MECP2-204ENST00000415944 HBS1LQ9Y450 684 aaKnown RBP8.8□□□□□ -1
MECP2-204ENST00000415944 PTPRDP23468 1912 aa8.8□□□□□ -1
MECP2-204ENST00000415944 PLXNA3P51805 1871 aa8.79□□□□□ -1
MECP2-204ENST00000415944 IGLV3-10A0A075B6K4 115 aa8.79□□□□□ -1
MECP2-204ENST00000415944 A0A087X1B8 175 aa8.79□□□□□ -1
MECP2-204ENST00000415944 CXorf51AA0A1B0GTR3 108 aa8.79□□□□□ -1
MECP2-204ENST00000415944 F8W8V4 182 aa8.79□□□□□ -1
MECP2-204ENST00000415944 PLIN3O60664 434 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MAGEC1O60732 1142 aa8.79□□□□□ -1
MECP2-204ENST00000415944 AVILO75366 819 aa8.79□□□□□ -1
MECP2-204ENST00000415944 TADA2AO75478 443 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ATP6V1G2O95670 118 aa8.79□□□□□ -1
MECP2-204ENST00000415944 CTSAP10619 480 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ALOX15P16050 662 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 POU3F3P20264 500 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 KCNA4P22459 653 aa8.79□□□□□ -1
MECP2-204ENST00000415944 FGFR3P22607 806 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MGAT1P26572 445 aa8.79□□□□□ -1
MECP2-204ENST00000415944 YWHAQP27348 245 aa8.79□□□□□ -1
MECP2-204ENST00000415944 TUFMP49411 452 aaKnown RBP8.79□□□□□ -1
MECP2-204ENST00000415944 NDUFV1P49821 464 aa8.79□□□□□ -1
MECP2-204ENST00000415944 SESN2P58004 480 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 IRX4P78413 519 aa8.79□□□□□ -1
MECP2-204ENST00000415944 POU4F1Q01851 419 aa8.79□□□□□ -1
MECP2-204ENST00000415944 DSG1Q02413 1049 aa8.79□□□□□ -1
MECP2-204ENST00000415944 GPR17Q13304 367 aa8.79□□□□□ -1
MECP2-204ENST00000415944 SLC12A1Q13621 1099 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MRPL58Q14197 206 aaKnown RBP8.79□□□□□ -1
MECP2-204ENST00000415944 RFTN1Q14699 578 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 GRIN2CQ14957 1233 aa8.79□□□□□ -1
MECP2-204ENST00000415944 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 CMPK2Q5EBM0 449 aa8.79□□□□□ -1
MECP2-204ENST00000415944 RALGPS1Q5JS13 557 aa8.79□□□□□ -1
MECP2-204ENST00000415944 WLSQ5T9L3 541 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MROH9Q5TGP6 573 aa8.79□□□□□ -1
MECP2-204ENST00000415944 KIAA0319Q5VV43 1072 aa8.79□□□□□ -1
MECP2-204ENST00000415944 PDE12Q6L8Q7 609 aaKnown RBP8.79□□□□□ -1
MECP2-204ENST00000415944 CGB2Q6NT52 195 aa8.79□□□□□ -1
MECP2-204ENST00000415944 PKN3Q6P5Z2 889 aa8.79□□□□□ -1
MECP2-204ENST00000415944 PRPF39Q86UA1 669 aaKnown RBP8.79□□□□□ -1
MECP2-204ENST00000415944 KCNMB4Q86W47 210 aa8.79□□□□□ -1
MECP2-204ENST00000415944 PYROXD2Q8N2H3 581 aa8.79□□□□□ -1
MECP2-204ENST00000415944 SKA1Q96BD8 255 aa8.79□□□□□ -1
MECP2-204ENST00000415944 SLC39A13Q96H72 371 aa8.79□□□□□ -1
MECP2-204ENST00000415944 VPS39Q96JC1 886 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ASB2Q96Q27 587 aa8.79□□□□□ -1
MECP2-204ENST00000415944 GPR22Q99680 433 aa8.79□□□□□ -1
MECP2-204ENST00000415944 TBL1YQ9BQ87 522 aa8.79□□□□□ -1
MECP2-204ENST00000415944 RTP3Q9BQQ7 232 aa8.79□□□□□ -1
MECP2-204ENST00000415944 BTBD10Q9BSF8 475 aa8.79□□□□□ -1
MECP2-204ENST00000415944 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ZYG11BQ9C0D3 744 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MYLK2Q9H1R3 596 aa8.79□□□□□ -1
MECP2-204ENST00000415944 DCLRE1BQ9H816 532 aa8.79□□□□□ -1
MECP2-204ENST00000415944 C10orf88Q9H8K7 445 aa8.79□□□□□ -1
MECP2-204ENST00000415944 KIF9Q9HAQ2 790 aa8.79□□□□□ -1
MECP2-204ENST00000415944 NOD2Q9HC29 1040 aa8.79□□□□□ -1
MECP2-204ENST00000415944 GLOD4Q9HC38 313 aa8.79□□□□□ -1
MECP2-204ENST00000415944 MLXIPLQ9NP71 852 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ALG13Q9NP73 1137 aaKnown RBP8.79□□□□□ -1
MECP2-204ENST00000415944 NPHS2Q9NP85 383 aa8.79□□□□□ -1
MECP2-204ENST00000415944 TLR9Q9NR96 1032 aa8.79□□□□□ -1
MECP2-204ENST00000415944 OSER1Q9NX31 292 aa8.79□□□□□ -1
MECP2-204ENST00000415944 LMCD1Q9NZU5 365 aa8.79□□□□□ -1
MECP2-204ENST00000415944 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
MECP2-204ENST00000415944 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
MECP2-204ENST00000415944 IRAK3Q9Y616 596 aa8.79□□□□□ -1
MECP2-204ENST00000415944 RFXAPO00287 272 aa8.78□□□□□ -1
MECP2-204ENST00000415944 TRIM13O60858 407 aa8.78□□□□□ -1
MECP2-204ENST00000415944 LILRB3O75022 631 aa8.78□□□□□ -1
MECP2-204ENST00000415944 BANF1O75531 89 aa8.78□□□□□ -1
MECP2-204ENST00000415944 LUC7L3O95232 432 aaKnown RBP8.78□□□□□ -1
MECP2-204ENST00000415944 LATS1O95835 1130 aa8.78□□□□□ -1
MECP2-204ENST00000415944 URODP06132 367 aa8.78□□□□□ -1
MECP2-204ENST00000415944 CSH1P0DML2 217 aa8.78□□□□□ -1
MECP2-204ENST00000415944 CSH2P0DML3 217 aa8.78□□□□□ -1
MECP2-204ENST00000415944 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
MECP2-204ENST00000415944 AOC1P19801 751 aa8.78□□□□□ -1
MECP2-204ENST00000415944 HLA-DPA1P20036 260 aa8.78□□□□□ -1
MECP2-204ENST00000415944 HARS2P49590 506 aaKnown RBP8.78□□□□□ -1
MECP2-204ENST00000415944 TUBP50607 506 aa8.78□□□□□ -1
MECP2-204ENST00000415944 ATXN1P54253 815 aaKnown RBP8.78□□□□□ -1
MECP2-204ENST00000415944 TBX4P57082 545 aa8.78□□□□□ -1
MECP2-204ENST00000415944 ERVFC1P60507 584 aa8.78□□□□□ -1
MECP2-204ENST00000415944 GAD2Q05329 585 aa8.78□□□□□ -1
MECP2-204ENST00000415944 GALNT1Q10472 559 aaPredicted RBP8.78□□□□□ -1
MECP2-204ENST00000415944 BST1Q10588 318 aa8.78□□□□□ -1
MECP2-204ENST00000415944 THOC5Q13769 683 aaKnown RBP8.78□□□□□ -1
MECP2-204ENST00000415944 EFTUD2Q15029 972 aaKnown RBP eCLIP8.78□□□□□ -1
MECP2-204ENST00000415944 CHI3L2Q15782 390 aa8.78□□□□□ -1
MECP2-204ENST00000415944 USP41Q3LFD5 358 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms