RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PQLC1Q8N2U9 271 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 FAM109AQ8N4B1 249 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 HM13Q8TCT9 377 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 C18orf8Q96DM3 657 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 TSEN34Q9BSV6 310 aaKnown RBP20.7■□□□□ 0.9
AP1S3-205ENST00000415298 NMUR2Q9GZQ4 415 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 MAGEE1Q9HCI5 957 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 ANLNQ9NQW6 1124 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 DNMT3BQ9UBC3 853 aaKnown RBP20.7■□□□□ 0.9
AP1S3-205ENST00000415298 ASIC3Q9UHC3 531 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 AMFRQ9UKV5 643 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 MYRFQ9Y2G1 1151 aa20.7■□□□□ 0.9
AP1S3-205ENST00000415298 KBTBD13C9JR72 458 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 ANKRD63C9JTQ0 380 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 K7ERI5 159 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SGPL1O95470 568 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 MNX1P50219 401 aaPredicted RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 RHAGQ02094 409 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 GALNT2Q10471 571 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SNX17Q15036 470 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 MAN2A1Q16706 1144 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 AARS2Q5JTZ9 985 aaKnown RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 TMEM126BQ8IUX1 230 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 AFAP1L2Q8N4X5 818 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 LIN7BQ9HAP6 207 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 AAASQ9NRG9 546 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SMIM35A0A1B0GVV1 85 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 DBTP11182 482 aaKnown RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 GFAPP14136 432 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 RPA3P35244 121 aaPredicted RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 MAGEA4P43358 317 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SRP54P61011 504 aaKnown RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SNTA1Q13424 505 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 TMED2Q15363 201 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SLC1A5Q15758 541 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 PERM1Q5SV97 790 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 TTC27Q6P3X3 843 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SIMC1Q8NDZ2 872 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 ZSWIM2Q8NEG5 633 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 TTC17Q96AE7 1141 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 ZNF347Q96SE7 839 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 TBCBQ99426 244 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 EMILIN2Q9BXX0 1053 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 NOL6Q9H6R4 1146 aaKnown RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 VPS37BQ9H9H4 285 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 SUCOQ9UBS9 1254 aaKnown RBP20.69■□□□□ 0.9
AP1S3-205ENST00000415298 NUP50Q9UKX7 468 aa20.69■□□□□ 0.9
AP1S3-205ENST00000415298 BET1O15155 118 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 TGDSO95455 350 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 TAF12Q16514 161 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 TCAIMQ8N3R3 496 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 INTS12Q96CB8 462 aaKnown RBP20.68■□□□□ 0.9
AP1S3-205ENST00000415298 SLC4A5Q9BY07 1137 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 KLQ9UEF7 1012 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 GPR32O75388 356 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 CABYRO75952 493 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 SNRPAP09012 282 aaKnown RBP20.68■□□□□ 0.9
AP1S3-205ENST00000415298 HCAR3P49019 387 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 NR2C2P49116 596 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 KDSRQ06136 332 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 SQLEQ14534 574 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 STAT4Q14765 748 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 CCNJQ5T5M9 372 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 SLC39A4Q6P5W5 647 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 CYP20A1Q6UW02 462 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 BNC2Q6ZN30 1099 aaPredicted RBP20.68■□□□□ 0.9
AP1S3-205ENST00000415298 UNC5AQ6ZN44 842 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 GALNT11Q8NCW6 608 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 GRPEL2Q8TAA5 225 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 SECISBP2Q96T21 854 aaKnown RBP20.68■□□□□ 0.9
AP1S3-205ENST00000415298 PCIF1Q9H4Z3 704 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 PSMD13Q9UNM6 376 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 ST14Q9Y5Y6 855 aa20.68■□□□□ 0.9
AP1S3-205ENST00000415298 DYRK3O43781 588 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 CA4P22748 312 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 DCKP27707 260 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 OR3A3P47888 321 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 PRAMEP78395 509 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 TRAP1Q12931 704 aaKnown RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 SNAP47Q5SQN1 464 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 STXBP4Q6ZWJ1 553 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 CENPUQ71F23 418 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 DSG4Q86SJ6 1040 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 CDR2LQ86X02 465 aaPredicted RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 MAP4K3Q8IVH8 894 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ADCY4Q8NFM4 1077 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 SNX18Q96RF0 628 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 OSMRQ99650 979 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 GCOM2Q9BZD3 368 aaPredicted RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 TRABDQ9H4I3 376 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 PDXKO00764 312 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ADSSP30520 456 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ETV1P50549 477 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 HK2P52789 917 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ARL4CP56559 192 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ZNF846Q147U1 533 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 LHFPL5Q8TAF8 219 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 TMEM40Q8WWA1 233 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 FIG4Q92562 907 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms