RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 RBM44Q6ZP01 1051 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CHST9Q7L1S5 443 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZDHHC17Q8IUH5 632 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 PASD1Q8IV76 773 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZSCAN1Q8NBB4 408 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 KCTD13Q8WZ19 329 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CALR3Q96L12 384 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 NEUROG2Q9H2A3 272 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 KCNF1Q9H3M0 494 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CSNK1G1Q9HCP0 422 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 NLGN3Q9NZ94 848 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 NCKIPSDQ9NZQ3 722 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 SERGEFQ9UGK8 458 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 PCDHA13Q9Y5I0 950 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 ITPR2Q14571 2701 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 FFAR2O15552 330 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 TCEA3O75764 348 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 TNFSF15O95150 251 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 THEGLP0DJG4 465 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 MMP8P22894 467 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 HLA-FP30511 346 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 CASRP41180 1078 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 STAT4Q14765 748 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 TBR1Q16650 682 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 PRPF39Q86UA1 669 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 FAM217AQ8IXS0 508 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 ZMIZ2Q8NF64 920 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 CTNNBL1Q8WYA6 563 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 C18orf8Q96DM3 657 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 APOLD1Q96LR9 279 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 SMOQ99835 787 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 DUSP23Q9BVJ7 150 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 TSGA10Q9BZW7 698 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 OSBPL2Q9H1P3 480 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 ST7Q9NRC1 585 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 WDR70Q9NW82 654 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 ADAM22Q9P0K1 906 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 PLEKHB1Q9UF11 243 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 GGA2Q9UJY4 613 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 PCDHGA7Q9Y5G6 932 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 ENTPD2Q9Y5L3 495 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 ADGRG1Q9Y653 693 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 UTP20O75691 2785 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 MYH10P35580 1976 aa13.89□□□□□ -0.19
RAPGEF1-204ENST00000414781 FBN2P35556 2912 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 A0A1W2PQH9 124 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 MID1O15344 667 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 SART1O43290 800 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 GOT1P17174 413 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 HOXD9P28356 352 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 VAV2P52735 878 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 ADPRHP54922 357 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 ST8SIA6P61647 398 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 PDCLQ13371 301 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 KIAA0907Q7Z7F0 614 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 C14orf80Q86SX3 495 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 ADIPOR2Q86V24 386 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 PIGZQ86VD9 579 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 DENND1CQ8IV53 801 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 MCOLN2Q8IZK6 566 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 OR14C36Q8NHC7 312 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 IFI44Q8TCB0 444 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 NMUR1Q9HB89 426 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 MRPL47Q9HD33 250 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 ANAPC2Q9UJX6 822 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 NUDT5Q9UKK9 219 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 ACSL6Q9UKU0 697 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 NENFQ9UMX5 172 aa13.88□□□□□ -0.19
RAPGEF1-204ENST00000414781 CCDC187A0A096LP49 1063 aa13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 KRT86O43790 486 aa13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 FBXO21O94952 628 aa13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 PABPC1P11940 636 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 POLR2EP19388 210 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 GABRB2P47870 512 aa13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 RPL34P49207 117 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 IFI16Q16666 785 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 HNRNPA1L2Q32P51 320 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-204ENST00000414781 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms