RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 OVGP1Q12889 678 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-205ENST00000413758 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-205ENST00000413758 ARTNQ5T4W7 220 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 MANEALQ5VSG8 457 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 ACAD10Q6JQN1 1059 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 NEK5Q6P3R8 708 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 IQCHQ86VS3 1027 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 NLRP14Q86W24 1093 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 PYROXD2Q8N2H3 581 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 ARHGEF2Q92974 986 aaKnown RBP17.13■□□□□ 0.33
COL6A2-205ENST00000413758 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 CNDP2Q96KP4 475 aaKnown RBP17.13■□□□□ 0.33
COL6A2-205ENST00000413758 HDAC8Q9BY41 377 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 MAGEH1Q9H213 219 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 RETREG1Q9H6L5 497 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 FZD3Q9NPG1 666 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
COL6A2-205ENST00000413758 KMT2BQ9UMN6 2715 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 RNF103O00237 685 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 KRIT1O00522 736 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ENC1O14682 589 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 BUB1O43683 1085 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ZNF821O75541 412 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 THEGLP0DJG4 465 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ITGB7P26010 798 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 L1CAMP32004 1257 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ZNF143P52747 638 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 SCAPQ12770 1279 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 BNIP3Q12983 259 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 SHBQ15464 509 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ASIC2Q16515 512 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 CCNI2Q6ZMN8 369 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 SPATS2Q86XZ4 545 aaKnown RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 OR6K2Q8NGY2 324 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 SAP25Q8TEE9 199 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 EPAS1Q99814 870 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 CNPY3Q9BT09 278 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 ERVMER34-1Q9H9K5 563 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
COL6A2-205ENST00000413758 TOR4AQ9NXH8 423 aa17.12■□□□□ 0.33
COL6A2-205ENST00000413758 NEMP1O14524 444 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 SDC3O75056 442 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 ADRB3P13945 408 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 HNRNPA2B1P22626 353 aaKnown RBP17.11■□□□□ 0.33
COL6A2-205ENST00000413758 SNRPD1P62314 119 aaKnown RBP17.11■□□□□ 0.33
COL6A2-205ENST00000413758 RPL7AP62424 266 aaKnown RBP17.11■□□□□ 0.33
COL6A2-205ENST00000413758 ZNF284Q2VY69 593 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 SEL1L3Q68CR1 1132 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 DHRS13Q6UX07 377 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 GALNT15Q8N3T1 639 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 ISG20Q96AZ6 181 aaKnown RBP17.11■□□□□ 0.33
COL6A2-205ENST00000413758 FEM1CQ96JP0 617 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 USP24Q9UPU5 2620 aa17.11■□□□□ 0.33
COL6A2-205ENST00000413758 FRYQ5TBA9 3013 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 DOCK9Q9BZ29 2069 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 SRRM3A6NNA2 597 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 KDELR3O43731 214 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 GKP32189 559 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 RXRGP48443 463 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 ZNF165P49910 485 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 CLDN2P57739 230 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 HS1BP3Q53T59 392 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 ATXN7L2Q5T6C5 722 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 PPP1R2P3Q6NXS1 205 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 PARS2Q7L3T8 475 aaKnown RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 TMPRSS7Q7RTY8 843 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 IRF2BP2Q7Z5L9 587 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 PTAR1Q7Z6K3 402 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 CCDC86Q9H6F5 360 aaKnown RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 CATSPERBQ9H7T0 1116 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 FZD10Q9ULW2 581 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
COL6A2-205ENST00000413758 ZFR2Q9UPR6 939 aaKnown RBP17.1■□□□□ 0.33
COL6A2-205ENST00000413758 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 ZSCAN5CA6NGD5 496 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-205ENST00000413758 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-205ENST00000413758 POP4O95707 220 aaKnown RBP17.09■□□□□ 0.33
COL6A2-205ENST00000413758 CD160O95971 181 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 GSRP00390 522 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 SERPINC1P01008 464 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 UGT2B4P06133 528 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 PSMA2P25787 234 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 RPS21P63220 83 aaKnown RBP17.09■□□□□ 0.33
COL6A2-205ENST00000413758 RAD51Q06609 339 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 DNAJC3Q13217 504 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 SGCGQ13326 291 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 KIAA1161Q6NSJ0 714 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 MARCH9Q86YJ5 346 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 OR2AP1Q8NGE2 309 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 BAP1Q92560 729 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 SLC17A9Q9BYT1 436 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms