RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DCP1BQ8IZD4 617 aaKnown RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 ZNF461Q8TAF7 563 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 MDM1Q8TC05 714 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 HTR3CQ8WXA8 447 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 FUBP3Q96I24 572 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 SPATA13Q96N96 652 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 LRRC3BQ96PB8 259 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 BBC3Q96PG8 261 aaPredicted RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 CCT8L2Q96SF2 557 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 DHRS4Q9BTZ2 278 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 DDIT4Q9NX09 232 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 GGA2Q9UJY4 613 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 MSRB2Q9Y3D2 182 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 TEX264Q9Y6I9 313 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 EBAG9O00559 213 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CDX4O14627 284 aaPredicted RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 PRRG1O14668 218 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 OPHN1O60890 802 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 VAV1P15498 845 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 HTR7P34969 479 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 MAGEA3P43357 314 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CCT5P48643 541 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 GEMIN4P57678 1058 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CDK16Q00536 496 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 FCHO2Q0JRZ9 810 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 NFE2Q16621 373 aaPredicted RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 FOXR1Q6PIV2 292 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 ARHGEF18Q6ZSZ5 1173 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TAC4Q86UU9 113 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TRABD2AQ86V40 505 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 LRRTM3Q86VH5 581 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CCDC110Q8TBZ0 833 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 EPAS1Q99814 870 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 BRD8Q9H0E9 1235 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 XAB2Q9HCS7 855 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 EIF2B3Q9NR50 452 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 GTSE1Q9NYZ3 720 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 RABGEF1Q9UJ41 708 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 ASCC3Q8N3C0 2202 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 SYNJ2BP-COX16A0A087WUM0 186 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TMEM120BA0PK00 339 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 BANF1O75531 89 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 SLC18A1P54219 525 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TPI1P60174 286 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CREB5Q02930 508 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TEAD2Q15562 447 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 BSPRYQ5W0U4 402 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 SLC8B1Q6J4K2 584 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 RALGPS2Q86X27 583 aaPredicted RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 PALM2Q8IXS6 379 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CYP4X1Q8N118 509 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 SYNPOQ8N3V7 929 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 DEFB124Q8NES8 71 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 DQX1Q8TE96 717 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 CHMP6Q96FZ7 201 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 ZFYVE19Q96K21 471 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 MAGEB5Q9BZ81 275 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 FAM107BQ9H098 131 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 ETNK1Q9HBU6 452 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 SSU72Q9NP77 194 aaKnown RBP17.47■□□□□ 0.39
PTPRC-206ENST00000413409 COX16Q9P0S2 106 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 MFHAS1Q9Y4C4 1052 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 INSL5Q9Y5Q6 135 aa17.47■□□□□ 0.39
PTPRC-206ENST00000413409 MYO16Q9Y6X6 1858 aa17.46■□□□□ 0.39
PTPRC-206ENST00000413409 TNFRSF10BO14763 440 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 PRPF4O43172 522 aaKnown RBP eCLIP17.46■□□□□ 0.38
PTPRC-206ENST00000413409 MAP3K6O95382 1288 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 MYL4P12829 197 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 BRAFP15056 766 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 STX2P32856 288 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 ELK3P41970 407 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 MAGEA11P43364 429 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 SLC5A3P53794 718 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 SEC24CP53992 1094 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 BRMS1LQ5PSV4 323 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 MICALCLQ6ZW33 695 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 PROSER1Q86XN7 944 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF317Q96PQ6 595 aaPredicted RBP17.46■□□□□ 0.38
PTPRC-206ENST00000413409 CYTH2Q99418 400 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 OSBPL2Q9H1P3 480 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 CYP4F11Q9HBI6 524 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 CHMP2BQ9UQN3 213 aa17.46■□□□□ 0.38
PTPRC-206ENST00000413409 NAV2Q8IVL1 2488 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 PCNX2A6NKB5 2137 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 OR6C75A6NL08 312 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 CYSRT1A8MQ03 144 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 RASA4BC9J798 803 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 POC1B-GALNT4F8VUJ3 575 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 TRIM66O15016 1216 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 IRAK2O43187 625 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 RASA4O43374 803 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 CREB3O43889 395 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 MLNP12872 115 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 MX2P20592 715 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 DRD4P21917 467 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ELF1P32519 619 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms