RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 NR1H3Q13133 447 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PTPRRQ15256 657 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PCSK7Q16549 785 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 SLC5A9Q2M3M2 681 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 TUBB8Q3ZCM7 444 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PABPC1LQ4VXU2 614 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 SPANXN3Q5MJ09 141 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ACBD5Q5T8D3 534 aaPredicted RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF697Q5TEC3 545 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 RNF219Q5W0B1 726 aaPredicted RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PKN3Q6P5Z2 889 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PACS1Q6VY07 963 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CDHR3Q6ZTQ4 885 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CCDC149Q6ZUS6 474 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 HTR3DQ70Z44 454 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 MARK2Q7KZI7 788 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CHST9Q7L1S5 443 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 TAOK1Q7L7X3 1001 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ADGRD2Q7Z7M1 963 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ITIH5Q86UX2 942 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 LRRC6Q86X45 466 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 BBS7Q8IWZ6 715 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 FAM217AQ8IXS0 508 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 SLC25A41Q8N5S1 370 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 GDAP1Q8TB36 358 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 MICAL1Q8TDZ2 1067 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF473Q8WTR7 871 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PABPC5Q96DU9 382 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 TMA16Q96EY4 203 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 LMLNQ96KR4 655 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZSWIM3Q96MP5 696 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 SEMA3CQ99985 751 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CCDC134Q9H6E4 229 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ENTPD7Q9NQZ7 604 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 BFARQ9NZS9 450 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CFAP97Q9P2B7 532 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 UXTQ9UBK9 157 aaPredicted RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF180Q9UJW8 692 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 CCL26Q9Y258 94 aa8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 AAR2Q9Y312 384 aaKnown RBP8.76□□□□□ -1.01
HMGN1P34-201ENST00000413023 PLXNA4Q9HCM2 1894 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ILVBLA1L0T0 632 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 MAGEB16A2A368 324 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 FAM47DPA6NHR8 397 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 GOLGA8TH3BQL2 631 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PRPF4O43172 522 aaKnown RBP eCLIP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CLDN11O75508 207 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 USP1O94782 785 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 GLUD1P00367 558 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PRLP01236 227 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 MT-ND3P03897 115 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PRKCGP05129 697 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 POLBP06746 335 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PTPN2P17706 415 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CR2P20023 1033 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 TAC1P20366 129 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ABCG1P45844 678 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PGGT1BP53609 377 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ARF5P84085 180 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ITKQ08881 620 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 MGAT5Q09328 741 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CDH17Q12864 832 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 SF3A3Q12874 501 aaKnown RBP eCLIP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 MTA1Q13330 715 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF177Q13360 481 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 MPP3Q13368 585 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 FRG1Q14331 258 aaKnown RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PTPRCAPQ14761 206 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 TEAD2Q15562 447 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ANO4Q32M45 955 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PPM1JQ5JR12 505 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PCID2Q5JVF3 399 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PRSS36Q5K4E3 855 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PPM1LQ5SGD2 360 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 IL31Q6EBC2 164 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 NAPEPLDQ6IQ20 393 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ESRP1Q6NXG1 681 aaKnown RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 LINGO4Q6UY18 593 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 TIFABQ6ZNK6 161 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 PIGWQ7Z7B1 504 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 LINC00523Q86TU6 105 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 APCDD1Q8J025 514 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 C12orf76Q8N812 135 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 DNAAF3Q8N9W5 541 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 BCAS4Q8TDM0 211 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 TCP10LQ8TDR4 215 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF669Q96BR6 464 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF707Q96C28 371 aaPredicted RBP8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 CERS2Q96G23 380 aa8.75□□□□□ -1.01
HMGN1P34-201ENST00000413023 LRRC3BQ96PB8 259 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms