RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HBS1LQ9Y450 684 aaKnown RBP24.9■■□□□ 1.58
VRK2-202ENST00000412104 HAUS5O94927 633 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 RPL17P18621 184 aaKnown RBP24.89■■□□□ 1.58
VRK2-202ENST00000412104 SNCBQ16143 134 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 CCDC153Q494R4 210 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 ACBD5Q5T8D3 534 aaPredicted RBP24.89■■□□□ 1.58
VRK2-202ENST00000412104 SLC8B1Q6J4K2 584 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 ESRP1Q6NXG1 681 aaKnown RBP24.89■■□□□ 1.58
VRK2-202ENST00000412104 CLEC14AQ86T13 490 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 ZC3HC1Q86WB0 502 aaKnown RBP24.89■■□□□ 1.58
VRK2-202ENST00000412104 ZNF354CQ86Y25 554 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 CNTN4Q8IWV2 1026 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 ACVR1CQ8NER5 493 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 GPR22Q99680 433 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 SAR1AQ9NR31 198 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 COPG2Q9UBF2 871 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 MTRRQ9UBK8 725 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 MARCOQ9UEW3 520 aaPredicted RBP24.89■■□□□ 1.58
VRK2-202ENST00000412104 OGDHLQ9ULD0 1010 aa24.89■■□□□ 1.58
VRK2-202ENST00000412104 UPP2O95045 317 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 EFEMP2O95967 443 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 MAXP61244 160 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 ZBTB16Q05516 673 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 C10orf107Q8IVU9 208 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 INPP5DQ92835 1189 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 MYEOVQ96EZ4 313 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 RHOJQ9H4E5 214 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 RAMP2O60895 175 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 VAPBO95292 243 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 KITP10721 976 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 ARNTP27540 789 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 ARCN1P48444 511 aaKnown RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 ALDH7A1P49419 539 aaKnown RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 KPNA1P52294 538 aaPredicted RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 IRF9Q00978 393 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 CDK18Q07002 472 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 ITKQ08881 620 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 GRM3Q14832 879 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 POLD3Q15054 466 aaPredicted RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 HSF5Q4G112 596 aaPredicted RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.88■■□□□ 1.57
VRK2-202ENST00000412104 TEX26Q8N6G2 289 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 SLC7A6OSQ96CW6 309 aaPredicted RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 PRR11Q96HE9 360 aaPredicted RBP24.88■■□□□ 1.57
VRK2-202ENST00000412104 VN1R3Q9BXE9 311 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 TREX1Q9NSU2 369 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 SLC2A6Q9UGQ3 507 aa24.88■■□□□ 1.57
VRK2-202ENST00000412104 C2P06681 752 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 TACR2P21452 398 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 HADHAP40939 763 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 CD86P42081 329 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 KCNQ1P51787 676 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 USP41Q3LFD5 358 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 PARP15Q460N3 678 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 ANKRD33Q7Z3H0 272 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 ATP13A1Q9HD20 1204 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 SAGE1Q9NXZ1 904 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 SLC39A10Q9ULF5 831 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 STK38LQ9Y2H1 464 aa24.87■■□□□ 1.57
VRK2-202ENST00000412104 ITM2AO43736 263 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 LYPLA1O75608 230 aaPredicted RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 ATP6V1G2O95670 118 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 SERPINE1P05121 402 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 OR1E1P30953 314 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 OR1D2P34982 312 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 CSRP3P50461 194 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 DSC2Q02487 901 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 TNK2Q07912 1038 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 SEPT6Q14141 434 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 NSMCE1Q8WV22 266 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 ARNT2Q9HBZ2 717 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 VPS45Q9NRW7 570 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 PARNO95453 639 aaKnown RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 MMP2P08253 660 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 GABRB3P28472 473 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 SLC1A6P48664 564 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 MAPKAPK2P49137 400 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 IL10RBQ08334 325 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 MTA1Q13330 715 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 SERINC3Q13530 473 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 ALYREFQ86V81 257 aaKnown RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 DENND6AQ8IWF6 608 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 RNF168Q8IYW5 571 aaPredicted RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 SLC25A41Q8N5S1 370 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 RAB3IPQ96QF0 476 aaPredicted RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 CDK5RAP1Q96SZ6 601 aaKnown RBP24.86■■□□□ 1.57
VRK2-202ENST00000412104 PRKD2Q9BZL6 878 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 CWH43Q9H720 699 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 BACE2Q9Y5Z0 518 aa24.86■■□□□ 1.57
VRK2-202ENST00000412104 AHSGP02765 367 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 CPA3P15088 417 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 PAMP19021 973 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 RASSF2P50749 326 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 AQP5P55064 265 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 HTRA3P83110 453 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 MPP1Q00013 466 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 RIPK1Q13546 671 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 CNGA3Q16281 694 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 UGP2Q16851 508 aa24.85■■□□□ 1.57
VRK2-202ENST00000412104 KIAA0930Q6ICG6 404 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms