RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.41■□□□□ 0.7
SF3A1-202ENST00000411423 CNTNAP3Q9BZ76 1288 aa19.41■□□□□ 0.7
SF3A1-202ENST00000411423 KDM4CQ9H3R0 1056 aa19.41■□□□□ 0.7
SF3A1-202ENST00000411423 DHX35Q9H5Z1 703 aaKnown RBP19.41■□□□□ 0.7
SF3A1-202ENST00000411423 LRRC19Q9H756 370 aa19.41■□□□□ 0.7
SF3A1-202ENST00000411423 ZFR2Q9UPR6 939 aaKnown RBP19.41■□□□□ 0.7
SF3A1-202ENST00000411423 BTBD3Q9Y2F9 522 aa19.41■□□□□ 0.7
SF3A1-202ENST00000411423 FARP1Q9Y4F1 1045 aaPredicted RBP19.41■□□□□ 0.7
SF3A1-202ENST00000411423 RNGTTO60942 597 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 CER1O95813 267 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 PRNPP04156 253 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 SPINK2P20155 84 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ETFBP38117 255 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 TPI1P60174 286 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 IL9RQ01113 521 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 SHBQ15464 509 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 TEAD4Q15561 434 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ZNF423Q2M1K9 1284 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ERMARDQ5T6L9 678 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 TXNRD3NBQ6F5E7 133 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 IL27RAQ6UWB1 636 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 DBX2Q6ZNG2 339 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ERN2Q76MJ5 926 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 PARS2Q7L3T8 475 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 TRIM69Q86WT6 500 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 CPNE8Q86YQ8 564 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 TP53INP2Q8IXH6 220 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 UMODL1-AS1Q8N2C9 162 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ISG20Q96AZ6 181 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 CELF6Q96J87 481 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 SERAC1Q96JX3 654 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 HEPHQ9BQS7 1158 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 SLC32A1Q9H598 525 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 ZDHHC6Q9H6R6 413 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 AASDHPPTQ9NRN7 309 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 HECAQ9UBI9 543 aaPredicted RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 LUC7L2Q9Y383 392 aaKnown RBP19.4■□□□□ 0.7
SF3A1-202ENST00000411423 SCINQ9Y6U3 715 aa19.4■□□□□ 0.7
SF3A1-202ENST00000411423 PCNX2A6NKB5 2137 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 CXorf51AA0A1B0GTR3 108 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 TMCC1O94876 653 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 ZNF883P0CG24 379 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 MYBL1P10243 752 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 CD38P28907 300 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 RECQLP46063 649 aaPredicted RBP19.39■□□□□ 0.69
SF3A1-202ENST00000411423 FOXC1Q12948 553 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 SERINC3Q13530 473 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 ADAT2Q7Z6V5 191 aaKnown RBP19.39■□□□□ 0.69
SF3A1-202ENST00000411423 ARHGAP12Q8IWW6 846 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 RNF214Q8ND24 703 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 HDAC8Q9BY41 377 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 SLC39A8Q9C0K1 460 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 TSPY26PQ9H489 355 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 CATSPERBQ9H7T0 1116 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 CAAP1Q9H8G2 361 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 PDFQ9HBH1 243 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 PREBQ9HCU5 417 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 PCOLCE2Q9UKZ9 415 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 MFHAS1Q9Y4C4 1052 aa19.39■□□□□ 0.69
SF3A1-202ENST00000411423 BZW2Q9Y6E2 419 aaKnown RBP19.39■□□□□ 0.69
SF3A1-202ENST00000411423 A0A1W2PQU0 124 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 J3KR12 359 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 EEF2KO00418 725 aaKnown RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 SPINT1O43278 529 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 BUB1O43683 1085 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 PRLRP16471 622 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 HNRNPH3P31942 346 aaKnown RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 ABL2P42684 1182 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 YBEYP58557 167 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 SIM1P81133 766 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 SHC2P98077 582 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 FGL2Q14314 439 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 CYTH1Q15438 398 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 ZNF284Q2VY69 593 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 FRYQ5TBA9 3013 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 SEL1L3Q68CR1 1132 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 NAPEPLDQ6IQ20 393 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 SPATS2Q86XZ4 545 aaKnown RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 PLPP6Q8IY26 295 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 NPWQ8N729 165 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 OR2AP1Q8NGE2 309 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 BAHD1Q8TBE0 780 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-202ENST00000411423 TRIM11Q96F44 468 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 MYOCQ99972 504 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 FZD3Q9NPG1 666 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 LHX3Q9UBR4 397 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 GGT7Q9UJ14 662 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 HPCAL4Q9UM19 191 aa19.38■□□□□ 0.69
SF3A1-202ENST00000411423 INSIG1O15503 277 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 FGF10O15520 208 aaPredicted RBP19.37■□□□□ 0.69
SF3A1-202ENST00000411423 RNF8O76064 485 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 GSRP00390 522 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 CYP1A2P05177 515 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 ADRB3P13945 408 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 ERCC2P18074 760 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 ITGB7P26010 798 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 EIF4A3P38919 411 aaKnown RBP19.37■□□□□ 0.69
SF3A1-202ENST00000411423 NXPH1P58417 271 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 SMTNL2Q2TAL5 461 aa19.37■□□□□ 0.69
SF3A1-202ENST00000411423 MYLK3Q32MK0 819 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms