RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 EXOGQ9Y2C4 368 aaKnown RBP0.61□□□□□ -2.31
RNU6-554P-201ENST00000410466 STXBP5LQ9Y2K9 1186 aa0.61□□□□□ -2.31
RNU6-554P-201ENST00000410466 FBN1P35555 2871 aaKnown RBP0.61□□□□□ -2.31
RNU6-554P-201ENST00000410466 A0A1W2PPL8 197 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 hDV102S1A0JD36 115 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 SRRM4A7MD48 611 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 HSPB6O14558 160 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 FOXH1O75593 365 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TMCC1O94876 653 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 IGKV3-11P04433 115 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ALDOCP09972 364 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 MYBL2P10244 700 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 CKMT1AP12532 417 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TRIM27P14373 513 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZNF32P17041 273 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 CAPN2P17655 700 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 PGFP49763 221 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ADORA2A-AS1P86434 159 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 SHC2P98077 582 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 POU5F1Q01860 360 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 CYP4A11Q02928 519 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 COX10Q12887 443 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TUBB2AQ13885 445 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TAF7LQ5H9L4 462 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TMEM196Q5HYL7 178 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 PDSS1Q5T2R2 415 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 KRT28Q7Z3Y7 464 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 MDGA2Q7Z553 956 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 DENND1CQ8IV53 801 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 EXD3Q8N9H8 876 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 PPHLN1Q8NEY8 458 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TRIM58Q8NG06 486 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 OR2T6Q8NHC8 308 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 PLBD2Q8NHP8 589 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TMEM18Q96B42 140 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZIM3Q96PE6 472 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 SDHCQ99643 169 aaPredicted RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 LRRC1Q9BTT6 524 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 MMTAG2Q9BU76 263 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TUBB2BQ9BVA1 445 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 OSBPL5Q9H0X9 879 aaPredicted RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 SFXN1Q9H9B4 322 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 CLK4Q9HAZ1 481 aaKnown RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 TMEM51Q9NW97 253 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 C2orf42Q9NWW7 574 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZDHHC2Q9UIJ5 367 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZNF256Q9Y2P7 627 aaPredicted RBP0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHB7Q9Y5E2 793 aa0.6□□□□□ -2.31
RNU6-554P-201ENST00000410466 KAT7O95251 611 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CAVIN2O95810 425 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 KRT6AP02538 564 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 KRT6BP04259 564 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 TRIM49P0CI25 452 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 TRIM49CP0CI26 452 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 ERVK-10P10266 1014 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 RFC1P35251 1148 aaPredicted RBP0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 GSTM5P46439 218 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 KRT6CP48668 564 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 RAB1AP62820 205 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 MS4A2Q01362 244 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 RELQ04864 619 aaPredicted RBP0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 RAPSNQ13702 412 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 ABCB5Q2M3G0 1257 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 GLIPR1L2Q4G1C9 344 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 DCST1Q5T197 706 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 PLAG1Q6DJT9 500 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CCDC144NLQ6NUI1 221 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZNF852Q6ZMS4 543 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 MICU3Q86XE3 530 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 YAF2Q8IY57 180 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 AADATQ8N5Z0 425 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CNTD1Q8N815 330 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 OR1N1Q8NGS0 311 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CHAC2Q8WUX2 184 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 REXO5Q96IC2 774 aaKnown RBP0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 FAM227BQ96M60 508 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 WDR24Q96S15 920 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CSF3RQ99062 836 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 GPATCH1Q9BRR8 931 aaKnown RBP0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 CHRDL1Q9BU40 450 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 SLC25A32Q9H2D1 315 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 HIPK3Q9H422 1215 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 MID2Q9UJV3 735 aa0.59□□□□□ -2.31
RNU6-554P-201ENST00000410466 ASTN2O75129 1339 aaPredicted RBP0.59□□□□□ -2.32
RNU6-554P-201ENST00000410466 TDRD15B5MCY1 1934 aaKnown RBP0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 C17orf102A2RUQ5 167 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 CPED1A4D0V7 1026 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 NPIPB5A8MRT5 1133 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 NPIPB4C9JG80 1138 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 CTNND1O60716 968 aaKnown RBP0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 VNN2O95498 520 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 NTSR2O95665 410 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 KITP10721 976 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 HOXC8P31273 242 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 HOXA1P49639 335 aaPredicted RBP0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 CYP2J2P51589 502 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 BRWD1-AS2P59051 145 aa0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 OASLQ15646 514 aaKnown RBP0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 TAF1BQ53T94 588 aaPredicted RBP0.58□□□□□ -2.32
RNU6-554P-201ENST00000410466 KCTD8Q6ZWB6 473 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms