RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NIPAL4Q0D2K0 466 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CDH17Q12864 832 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 NR1H3Q13133 447 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 OLIG2Q13516 323 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 IHHQ14623 411 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TEAD2Q15562 447 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ARHGAP15Q53QZ3 475 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 GPR158Q5T848 1215 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ELMSAN1Q6PJG2 1045 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 RANBP10Q6VN20 620 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 EXOC3L1Q86VI1 746 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 BBS7Q8IWZ6 715 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CYP4X1Q8N118 509 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ARFGAP2Q8N6H7 521 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 OR7D4Q8NG98 312 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SPATA22Q8NHS9 363 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 RIN3Q8TB24 985 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SLC44A1Q8WWI5 657 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MRGPRX2Q96LB1 330 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PAFAH2Q99487 392 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MGME1Q9BQP7 344 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 NKX2-4Q9H2Z4 354 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CENPHQ9H3R5 247 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF180Q9UJW8 692 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TRANK1O15050 2925 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SMIM23A6NLE4 172 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TSPAN3O60637 253 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TBL1XO60907 577 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ZMPSTE24O75844 475 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 USP1O94782 785 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MT-CYBP00156 380 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PEX19P40855 299 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 OXCT1P55809 520 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 IRX1P78414 480 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 NAB1Q13506 487 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CRYMQ14894 314 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TERF2Q15554 542 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF77Q15935 545 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 KBTBD12Q3ZCT8 623 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SPANXN3Q5MJ09 141 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 POTEHQ6S545 545 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CAPN12Q6ZSI9 719 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TMEM135Q86UB9 458 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TRABD2AQ86V40 505 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 NSMCE1Q8WV22 266 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 USP13Q92995 863 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TTC17Q96AE7 1141 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PABPC5Q96DU9 382 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CFAP36Q96G28 342 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 LMLNQ96KR4 655 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CDCA3Q99618 268 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 IL22Q9GZX6 179 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MRM3Q9HC36 420 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 NT5MQ9NPB1 228 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SMYD2Q9NRG4 433 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SOX13Q9UN79 622 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CCDC195A0A1B0GUA6 201 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 FAM237BA0A1B0GVD1 139 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MAGEB16A2A368 324 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TYW5A2RUC4 315 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 EPOPA6NHQ4 379 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF197O14709 1029 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PER2O15055 1255 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MUSKO15146 869 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 USP12O75317 370 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CSPG5O95196 566 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CD160O95971 181 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CR2P20023 1033 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SESN2P58004 480 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ARF5P84085 180 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MSLNQ13421 630 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MPPE1Q53F39 396 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 FSCBQ5H9T9 825 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 FYB2Q5VWT5 728 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MARK2Q7KZI7 788 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TAOK1Q7L7X3 1001 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TDRD5Q8NAT2 981 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 VN1R2Q8NFZ6 395 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SH3RF2Q8TEC5 729 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PTCD2Q8WV60 388 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TMA16Q96EY4 203 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PSKH2Q96QS6 385 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TRIM56Q9BRZ2 755 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 KIFC1Q9BW19 673 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 POLR1EQ9GZS1 481 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CXorf56Q9H5V9 222 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CNOT10Q9H9A5 744 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 BFARQ9NZS9 450 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 UBA2Q9UBT2 640 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SUFUQ9UMX1 484 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CCL26Q9Y258 94 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ZCWPW2A0A1B0GU75 182 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 LOC285095A0A1B0GVY8 99 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 ERICH4A6NGS2 130 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 A6NNZ2 444 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 POC1B-GALNT4F8VUJ3 575 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 H0YHG0 523 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PENKP01210 267 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms