RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 C9orf64Q5T6V5 341 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 DARS2Q6PI48 645 aaKnown RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 TMEM92Q6UXU6 159 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 TMEM105Q8N8V8 129 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 PRELID2Q8N945 189 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 OR2AP1Q8NGE2 309 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 HTR3CQ8WXA8 447 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF419Q96HQ0 510 aaPredicted RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 CAPZA3Q96KX2 299 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 CCDC114Q96M63 670 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 VAT1Q99536 393 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 FERMT1Q9BQL6 677 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 TNKS2Q9H2K2 1166 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 MTG2Q9H4K7 406 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 FBRSQ9HAH7 460 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 C11orf16Q9NQ32 467 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 PRSS16Q9NQE7 514 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 ANKRD36A6QL64 1941 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 CFAP69A5D8W1 941 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 ALOX15BO15296 676 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 GPR37L1O60883 481 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 PAPSS2O95340 614 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 IGSF6O95976 241 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 COL9A1P20849 921 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 PTPN3P26045 913 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 PAFAH1B1P43034 410 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 RECQLP46063 649 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 CCR3P51677 355 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 DGKEP52429 567 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 NSUN2Q08J23 767 aaKnown RBP eCLIP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 WASHC5Q12768 1159 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 ZBTB17Q13105 803 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 ELAVL3Q14576 367 aaKnown RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 CYP1B1Q16678 543 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 CARD16Q5EG05 197 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 KIAA1211LQ6NV74 962 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 C12orf50Q8NA57 414 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 TSEN2Q8NCE0 465 aaKnown RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 OR2A12Q8NGT7 310 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 KIF18AQ8NI77 898 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF592Q92610 1267 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 GDAP1L1Q96MZ0 367 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 MGME1Q9BQP7 344 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 TM6SF2Q9BZW4 377 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 POLMQ9NP87 494 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 RBM22Q9NW64 420 aaKnown RBP eCLIP16.88■□□□□ 0.29
SUMO1-208ENST00000409627 SEPT10Q9P0V9 454 aa16.88■□□□□ 0.29
SUMO1-208ENST00000409627 PRR33A8MZF0 331 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 KRIT1O00522 736 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 MUSKO15146 869 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 NEBLO76041 1014 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 JCHAINP01591 159 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 ITGAVP06756 1048 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 C7P10643 843 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 CSNK1DP48730 415 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 CCNHP51946 323 aaPredicted RBP16.87■□□□□ 0.29
SUMO1-208ENST00000409627 TEX44Q53QW1 395 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 ALG1LQ6GMV1 187 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 DPY19L3Q6ZPD9 716 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 OR2T3Q8NH03 318 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 AP1M1Q9BXS5 423 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 C10orf88Q9H8K7 445 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 USP29Q9HBJ7 922 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 NT5MQ9NPB1 228 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 C2orf42Q9NWW7 574 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 DRG1Q9Y295 367 aaKnown RBP16.87■□□□□ 0.29
SUMO1-208ENST00000409627 ATP8A1Q9Y2Q0 1164 aa16.87■□□□□ 0.29
SUMO1-208ENST00000409627 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
SUMO1-208ENST00000409627 FAM86C2PA6NEL3 165 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 RNF103O00237 685 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 PDE2AO00408 941 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 KCNN4O15554 427 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 BNIP3LO60238 219 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 URI1O94763 535 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 STK10O94804 968 aaKnown RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 CR2P20023 1033 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 RGRP47804 291 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 CXCL12P48061 93 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 COPAP53621 1224 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 SNX1Q13596 522 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 TUBB2AQ13885 445 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 RALGPS1Q5JS13 557 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 ATXN7L2Q5T6C5 722 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 STK40Q8N2I9 435 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 CNTD1Q8N815 330 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 RTP4Q96DX8 246 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 EXOC2Q96KP1 924 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 TEKT5Q96M29 485 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 NUDCD1Q96RS6 583 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 TMEM121Q9BTD3 319 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 TUBB2BQ9BVA1 445 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 C1QTNF1Q9BXJ1 281 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms