RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 TNKS2Q9H2K2 1166 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 NCKIPSDQ9NZQ3 722 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 LRRK1Q38SD2 2015 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 SPINT1O43278 529 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 ZNF821O75541 412 aaPredicted RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 LEFTY1O75610 366 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 JUNDP17535 347 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 RABIFP47224 123 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 CLCN6P51797 869 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 NEK3P51956 506 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 EIF2B5Q13144 721 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 NR0B2Q15466 257 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 EFHC1Q5JVL4 640 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 OTUD1Q5VV17 481 aaPredicted RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 FOXR1Q6PIV2 292 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 DPY19L3Q6ZPD9 716 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 WDR36Q8NI36 951 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 LMX1AQ8TE12 382 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 PPP1R16AQ96I34 528 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 FEM1CQ96JP0 617 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 GTPBP4Q9BZE4 634 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 INTS2Q9H0H0 1204 aaKnown RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 ANLNQ9NQW6 1124 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 FADS3Q9Y5Q0 445 aa17.25■□□□□ 0.35
SCRN1-203ENST00000409570 UBR5O95071 2799 aaPredicted RBP17.25■□□□□ 0.35
SCRN1-203ENST00000409570 I6L893 689 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 TPP1O14773 563 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 PSMA7O14818 248 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 EFSO43281 561 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 TCEA3O75764 348 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 SMC2O95347 1197 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 ADRB3P13945 408 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 MLLT3P42568 568 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 PDX1P52945 283 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 PDE1CQ14123 709 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 ZSCAN23Q3MJ62 389 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 ARL13BQ3SXY8 428 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 FAM183BPQ6ZVS7 135 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 SETD3Q86TU7 594 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 ARL14Q8N4G2 192 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 EXD3Q8N9H8 876 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 DHTKD1Q96HY7 919 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 IL12RB2Q99665 862 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 BOCQ9BWV1 1114 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 UBE2TQ9NPD8 197 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
SCRN1-203ENST00000409570 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
SCRN1-203ENST00000409570 LRP4O75096 1905 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 BECN2A8MW95 431 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 M0QYT0 321 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 MUSKO15146 869 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 AP1G1O43747 822 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 ENDOD1O94919 500 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 TNFSF15O95150 251 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 ADCY5O95622 1261 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 ITGB7P26010 798 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 L1CAMP32004 1257 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 RECQLP46063 649 aaPredicted RBP17.23■□□□□ 0.35
SCRN1-203ENST00000409570 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
SCRN1-203ENST00000409570 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 OLFML1Q6UWY5 402 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 PRICKLE2Q7Z3G6 844 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 RBFAQ8N0V3 343 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 OR7D4Q8NG98 312 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 LENG8Q96PV6 779 aaPredicted RBP17.23■□□□□ 0.35
SCRN1-203ENST00000409570 CCNL2Q96S94 520 aaPredicted RBP17.23■□□□□ 0.35
SCRN1-203ENST00000409570 C1QTNF2Q9BXJ5 285 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 TCEAL2Q9H3H9 227 aaPredicted RBP17.23■□□□□ 0.35
SCRN1-203ENST00000409570 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 ARHGEF38Q9NXL2 777 aa17.23■□□□□ 0.35
SCRN1-203ENST00000409570 CCDC187A0A096LP49 1063 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 DRGXA6NNA5 263 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 FPGTO14772 594 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 DAB1O75553 588 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 GCATO75600 419 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 TFE3P19532 575 aaPredicted RBP17.22■□□□□ 0.35
SCRN1-203ENST00000409570 NOS2P35228 1153 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
SCRN1-203ENST00000409570 CSRP3P50461 194 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 PFN3P60673 137 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 NFATC3Q12968 1075 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 STIM1Q13586 685 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 LINC00303Q3SY05 128 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 ARTNQ5T4W7 220 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 ISM2Q6H9L7 571 aa17.22■□□□□ 0.35
SCRN1-203ENST00000409570 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
SCRN1-203ENST00000409570 PARS2Q7L3T8 475 aaKnown RBP17.22■□□□□ 0.35
SCRN1-203ENST00000409570 TFAP2DQ7Z6R9 452 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms