RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 RTN2O75298 545 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 KRT37O76014 449 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 APOA4P06727 396 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 GALTP07902 379 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 ALPIP09923 528 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 MTTPP55157 894 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 EIF3EP60228 445 aaKnown RBP7.4□□□□□ -1.22
SCN9A-202ENST00000409435 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 NDUFA9Q16795 377 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 THOC7Q6I9Y2 204 aaKnown RBP7.4□□□□□ -1.22
SCN9A-202ENST00000409435 CYGBQ8WWM9 190 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 MSANTD3Q96H12 275 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 CBWD1Q9BRT8 395 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 TMEM165Q9HC07 324 aa7.4□□□□□ -1.22
SCN9A-202ENST00000409435 TRMT6Q9UJA5 497 aaKnown RBP7.4□□□□□ -1.22
SCN9A-202ENST00000409435 PRCPP42785 496 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 NCKAP1LP55160 1127 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 ACAP2Q15057 778 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TAB1Q15750 504 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TSGA10IPQ3SY00 556 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TMEM240Q5SV17 173 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 CMTM5Q96DZ9 223 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 ACBD6Q9BR61 282 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 GOLGA2P5Q9HBQ8 144 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 SLC40A1Q9NP59 571 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 FKBP14Q9NWM8 211 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 CCDC59Q9P031 241 aaKnown RBP7.4□□□□□ -1.23
SCN9A-202ENST00000409435 STOML2Q9UJZ1 356 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 A0A0B4J269 797 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 ADH1BP00325 375 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 MATKP42679 507 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 BTN3A2P78410 334 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TUBB3Q13509 450 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 PTK6Q13882 451 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF720Q7Z2F6 126 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 FAM131BQ86XD5 332 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 CLEC4DQ8WXI8 215 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TTC17Q96AE7 1141 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 CEP44Q9C0F1 390 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 TKTL2Q9H0I9 626 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 EPN3Q9H201 632 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 PSD3Q9NYI0 1048 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 WNT6Q9Y6F9 365 aa7.4□□□□□ -1.23
SCN9A-202ENST00000409435 FAM86C2PA6NEL3 165 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 FAM205CA6NFA0 338 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SNTNA6NMZ2 147 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 TM7SF2O76062 418 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 GJB6O95452 261 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CYP2F1P24903 491 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SLC1A1P43005 524 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 MRNIPQ6NTE8 343 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 FAM172AQ8WUF8 416 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PTPRN2Q92932 1015 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 APOL4Q9BPW4 351 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CACNA2D2Q9NY47 1150 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 USE1Q9NZ43 259 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 MAFFQ9ULX9 164 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 DNAJC16Q9Y2G8 782 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 A0A1W2PQ67 120 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PSTPIP1O43586 416 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 VPS26AO75436 327 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SRP72O76094 671 aaKnown RBP7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CST5P28325 142 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-202ENST00000409435 TRIP10Q15642 601 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 TTC33Q6PID6 262 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SH3RF1Q7Z6J0 888 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF461Q8TAF7 563 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SNF8Q96H20 258 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SGIP1Q9BQI5 828 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 ZYG11BQ9C0D3 744 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 NOD2Q9HC29 1040 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 SMARCAL1Q9NZC9 954 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 HCN3Q9P1Z3 774 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 TRIM49BA6NDI0 452 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 RGS5O15539 181 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PSMD10O75832 226 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 KRT33AO76009 404 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CCNDBP1O95273 360 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 ITGB5P18084 799 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CYP2A7P20853 494 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PLGLB1Q02325 96 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 EPS8Q12929 822 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 KIAA0319Q5VV43 1072 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 OR8H2Q8N162 312 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF518BQ9C0D4 1074 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 WWP1Q9H0M0 922 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 GDE1Q9NZC3 331 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 MAFBQ9Y5Q3 323 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-202ENST00000409435 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.39□□□□□ -1.23
SCN9A-202ENST00000409435 TRBV23OR9-2A0A075B6M9 112 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 EDDM13A0A1B0GTR0 161 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CENPXA8MT69 81 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 CLDN11O75508 207 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 ARIH2O95376 493 aa7.39□□□□□ -1.23
SCN9A-202ENST00000409435 PAX7P23759 505 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms