RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZNF683Q8IZ20 524 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 SLC25A45Q8N413 288 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 TMEM145Q8NBT3 493 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 RFFLQ8WZ73 363 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 KLK6Q92876 244 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 PGAP3Q96FM1 320 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 ANLNQ9NQW6 1124 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 TMEM51Q9NW97 253 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 AJAP1Q9UKB5 411 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 STAP1Q9ULZ2 295 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 SNX10Q9Y5X0 201 aa9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 NYNRINQ9P2P1 1898 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-203ENST00000409129 RELNP78509 3460 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 A0A0D9SEW6 157 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 I6L893 689 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 RNF103O00237 685 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 TRIM38O00635 465 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 PRNPP04156 253 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 PNMA6AP0CW24 399 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 C6P13671 934 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 PRLRP16471 622 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 GLDCP23378 1020 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 DGKAP23743 735 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 RRM1P23921 792 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 AKT2P31751 481 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 GABRB2P47870 512 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 SULT1E1P49888 294 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 E2F1Q01094 437 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 INSM1Q01101 510 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 DEUP1Q05D60 604 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 SLC25A52Q3SY17 297 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 ACBD5Q5T8D3 534 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 HORMAD1Q86X24 394 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 ERICH1Q86X53 443 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 FAM71AQ8IYT1 594 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 CHST14Q8NCH0 376 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 TMEM35BQ8NCS4 154 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 BAP1Q92560 729 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 TBCBQ99426 244 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 MYOCQ99972 504 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 HDAC8Q9BY41 377 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 MPP6Q9NZW5 540 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 IL36AQ9UHA7 158 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 CLCA2Q9UQC9 943 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 LRRK2Q5S007 2527 aa9.37□□□□□ -0.91
NIF3L1-203ENST00000409129 IGLV3-10A0A075B6K4 115 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 ILVBLA1L0T0 632 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 CAPN8A6NHC0 703 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 SRGAP2O75044 1071 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 PCDH8O95206 1070 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 MT-CO3P00414 261 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 HNRNPA2B1P22626 353 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 OR1E1P30953 314 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 CDH5P33151 784 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 SCNN1AP37088 669 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 RECQLP46063 649 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 CSRP3P50461 194 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 DAB2P98082 770 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 SLC20A2Q08357 652 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 MAN2A1Q16706 1144 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 TPD52L1Q16890 204 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 HS1BP3Q53T59 392 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 ARTNQ5T4W7 220 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 DPY19L2P1Q6NXN4 242 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 C22orf39Q6P5X5 142 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 ZNF783Q6ZMS7 281 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 TFAP2DQ7Z6R9 452 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 XYLT1Q86Y38 959 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 DCBLD1Q8N8Z6 715 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 DCAF4L2Q8NA75 395 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 OR13H1Q8NG92 308 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 OR4C6Q8NH72 309 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 FAM174AQ8TBP5 190 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 TTC9Q92623 222 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 FGF11Q92914 225 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 HAPLN3Q96S86 360 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 SPON2Q9BUD6 331 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 CALN1Q9BXU9 219 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 TNKS2Q9H2K2 1166 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 NDST4Q9H3R1 872 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 FZD3Q9NPG1 666 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms