RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TIGD5Q53EQ6 642 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 METTL21CQ5VZV1 264 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 PLEKHH3Q7Z736 793 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 APLFQ8IW19 511 aaPredicted RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 TXNDC5Q8NBS9 432 aaKnown RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 CMTM5Q96DZ9 223 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 MARK4Q96L34 752 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 PPP1R36Q96LQ0 422 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 RHOJQ9H4E5 214 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 NOL6Q9H6R4 1146 aaKnown RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 LRRC4Q9HBW1 653 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TCF7L2Q9NQB0 619 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 IGSF5Q9NSI5 407 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 UBAP1Q9NZ09 502 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 VPS28Q9UK41 221 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TRHDEQ9UKU6 1024 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 CDY2AQ9Y6F7 541 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 CDY1Q9Y6F8 540 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TCAF2A6NFQ2 919 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ARHGAP42A6NI28 874 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ACOT8O14734 319 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 NCAM2O15394 837 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 BAG2O95816 211 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 JCHAINP01591 159 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 GNAT1P11488 350 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 XRCC1P18887 633 aaPredicted RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 SERPINB5P36952 375 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 SLC1A2P43004 574 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 CHRNA4P43681 627 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 NPY2RP49146 381 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 FAM110CQ1W6H9 321 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ANO4Q32M45 955 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 LRRC8EQ6NSJ5 796 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ESRP1Q6NXG1 681 aaKnown RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 OR10T2Q8NGX3 314 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 PPP4R1Q8TF05 950 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 MYLPFQ96A32 169 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 KLHL32Q96NJ5 620 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TRAPPC9Q96Q05 1148 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 SLC39A10Q9ULF5 831 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 RAP2CQ9Y3L5 183 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 STX16-NPEPL1H3BU86 382 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TIMM44O43615 452 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 AP1G1O43747 822 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 GLRBP48167 497 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 CTBP1Q13363 440 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 GK3PQ14409 553 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TLR1Q15399 786 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 NOMO2Q5JPE7 1267 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ZNF683Q8IZ20 524 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 DSELQ8IZU8 1212 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 SCAMP5Q8TAC9 235 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 DQX1Q8TE96 717 aaKnown RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 BRD8Q9H0E9 1235 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ZBTB26Q9HCK0 441 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ATP13A1Q9HD20 1204 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 OSER1Q9NX31 292 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 BFARQ9NZS9 450 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 TLL2Q9Y6L7 1015 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 MGEA5O60502 916 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 PIGNO95427 931 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 CHRNA1P02708 482 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 HLA-DQB2P05538 268 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SPATA31D3P0C874 917 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 UQCRBP14927 111 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 TFEBP19484 476 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 PURAQ00577 322 aaKnown RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 MGAT3Q09327 533 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 ASPHQ12797 758 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 DCLRE1AQ6PJP8 1040 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 CNSTQ6PJW8 725 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SPATA31D4Q6ZUB0 917 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SNX32Q86XE0 403 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 GALNT15Q8N3T1 639 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 DNAAF3Q8N9W5 541 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 PPP2R3CQ969Q6 453 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 NXNL1Q96CM4 212 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SLC10A4Q96EP9 437 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 GAD1Q99259 594 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 OLFM1Q99784 485 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 MED10Q9BTT4 135 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 NUF2Q9BZD4 464 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 UNKQ9C0B0 810 aaKnown RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 STK39Q9UEW8 545 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SCOCQ9UIL1 159 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 NEMP1O14524 444 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 TNFRSF10BO14763 440 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 HDAC3O15379 428 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 HSPA4LO95757 839 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 MSX2P35548 267 aaPredicted RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 RPL14P50914 215 aaKnown RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 IRX1P78414 480 aaPredicted RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 TIAL1Q01085 375 aaKnown RBP eCLIP9.98□□□□□ -0.81
MSH2-202ENST00000406134 CREB5Q02930 508 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 CDH17Q12864 832 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 PKN3Q6P5Z2 889 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 RPS27LQ71UM5 84 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms