RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 GPR15P49685 360 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNED1-205ENST00000405547 SLC41A1Q8IVJ1 513 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 PSMD13Q9UNM6 376 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ADCY6O43306 1168 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 CABYRO75952 493 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 TM7SF2O76062 418 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 IDO1P14902 403 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 NR1D2Q14995 579 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 DGKKQ5KSL6 1271 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 SNRNP25Q9BV90 132 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 FAM126AQ9BYI3 521 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TSC22D2O75157 780 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 RAB27AP51159 221 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 NKAPQ8N5F7 415 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 SLC44A1Q8WWI5 657 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ALG9Q9H6U8 611 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TRPC4Q9UBN4 977 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TAF4O00268 1085 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ERBB2P04626 1255 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 GRK4P32298 578 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 C10orf107Q8IVU9 208 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 SPATA2Q9UM82 520 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 COL5A2P05997 1499 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 DMPKQ09013 629 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 GRIK3Q13003 919 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 POLR1BQ9H9Y6 1135 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 CCNB1P14635 433 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ATP13A4Q4VNC1 1196 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 INTS11Q5TA45 600 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 CDK20Q8IZL9 346 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 UBASH3BQ8TF42 649 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 MECRQ9BV79 373 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 WDR12Q9GZL7 423 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 AAASQ9NRG9 546 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ZMYM5Q9UJ78 669 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 LOC100506127A0A0U1RQW1 187 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 NOL4O94818 638 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 MBL2P11226 248 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 MMP8P22894 467 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 KHDRBS2Q5VWX1 349 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 LENG9Q96B70 501 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TSEN34Q9BSV6 310 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 TRMOQ9BU70 441 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 DHX33Q9H6R0 707 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 ZNF112Q9UJU3 913 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 NUP62P37198 522 aaPredicted RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 DGCR6Q14129 220 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 RINLQ6ZS11 566 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 FITM2Q8N6M3 262 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 FAM50BQ9Y247 325 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 HBS1LQ9Y450 684 aaKnown RBP13.5□□□□□ -0.25
SNED1-205ENST00000405547 TMEM191CA6NGB0 347 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 H0YC42 278 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 BPGMP07738 259 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 CDH3P22223 829 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 CAPZA2P47755 286 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TGFB2P61812 414 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 EPHX4Q8IUS5 362 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TMEM159Q96B96 161 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 TCF12Q99081 682 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
SNED1-205ENST00000405547 STX11O75558 287 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
SNED1-205ENST00000405547 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 ZNF549Q6P9A3 640 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 LRRC49Q8IUZ0 686 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 PROX1Q92786 737 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 TTYH3Q9C0H2 523 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 BMP10O95393 424 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 TAS2R40P59535 323 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 PRKG2Q13237 762 aa13.49□□□□□ -0.25
SNED1-205ENST00000405547 PHKG1Q16816 387 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms