RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 MIA3Q5JRA6 1907 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 GREM1O60565 184 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 CXCL14O95715 111 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 LATS1O95835 1130 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 IRF1P10914 325 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 HOXD9P28356 352 aaPredicted RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 WNT3AP56704 352 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 MAXP61244 160 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 DSC2Q02487 901 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 IFT88Q13099 833 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 SMAD1Q15797 465 aaKnown RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 PABPC1LQ4VXU2 614 aaKnown RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 STXBP5Q5T5C0 1151 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 TEDDM1Q5T9Z0 273 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 PKN3Q6P5Z2 889 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
PARVB-203ENST00000404989 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 ZNF778Q96MU6 729 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 LRRC3Q9BY71 257 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 STOML2Q9UJZ1 356 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
PARVB-203ENST00000404989 A0A0D9SEW6 157 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 TTC24A2A3L6 582 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 OLFM2O95897 454 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 HADHAP40939 763 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CSE1LP55060 971 aaKnown RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 ZXDBP98169 803 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 GNA12Q03113 381 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 FPGSQ05932 587 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 LBRQ14739 615 aaKnown RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 ADGRF1Q5T601 910 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 PDPK2PQ6A1A2 396 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 SPATA21Q7Z572 469 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 OR7D4Q8NG98 312 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 SPOCK2Q92563 424 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 SRPK1Q96SB4 655 aaKnown RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 ARNT2Q9HBZ2 717 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 MUSKO15146 869 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CLDN11O75508 207 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 PAMP19021 973 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CRHR1P34998 444 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CD86P42081 329 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CHRNA4P43681 627 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 DBN1Q16643 649 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 TMCO4Q5TGY1 634 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 CHST9Q7L1S5 443 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 TMC8Q8IU68 726 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 HS6ST3Q8IZP7 471 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 ZNF75CPQ92670 426 aaPredicted RBP16.47■□□□□ 0.23
PARVB-203ENST00000404989 AGAP2Q99490 1192 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 MCMBPQ9BTE3 642 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 SMPD4Q9NXE4 827 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 ARL2BPQ9Y2Y0 163 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 PLLPQ9Y342 182 aa16.47■□□□□ 0.23
PARVB-203ENST00000404989 GFRA2O00451 464 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 NRG2O14511 850 aaPredicted RBP16.46■□□□□ 0.23
PARVB-203ENST00000404989 TIMM44O43615 452 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 KDELR3O43731 214 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 TSPAN3O60637 253 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ITGA2BP08514 1039 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ETFBP38117 255 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 NUMBP49757 651 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 CORO7P57737 925 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ERVFC1P60507 584 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 PDE1BQ01064 536 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ITKQ08881 620 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 SF3A3Q12874 501 aaKnown RBP eCLIP16.46■□□□□ 0.23
PARVB-203ENST00000404989 POU6F1Q14863 301 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 INSCQ1MX18 579 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 RNF187Q5TA31 235 aaPredicted RBP16.46■□□□□ 0.23
PARVB-203ENST00000404989 TXNDC8Q6A555 127 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 GAREM2Q75VX8 874 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 KDELC2Q7Z4H8 507 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 KCNMB4Q86W47 210 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 NDUFAF2Q8N183 169 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 FAM111AQ96PZ2 611 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 C20orf96Q9NUD7 363 aaPredicted RBP16.46■□□□□ 0.23
PARVB-203ENST00000404989 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 DCDC2Q9UHG0 476 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 TBC1D30Q9Y2I9 924 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 TCAF1Q9Y4C2 921 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 ACTL7AQ9Y615 435 aa16.46■□□□□ 0.23
PARVB-203ENST00000404989 MKI67P46013 3256 aaKnown RBP16.45■□□□□ 0.22
PARVB-203ENST00000404989 MTCL1Q9Y4B5 1905 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms