RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TMEM184AQ6ZMB5 413 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZNF534Q76KX8 674 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 HOMEZQ8IX15 550 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 AGGF1Q8N302 714 aaeCLIP3.77□□□□□ -1.81
RTN4-208ENST00000404909 PGBD5Q8N414 524 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ATP11CQ8NB49 1132 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MCUQ8NE86 351 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 BPIFB1Q8TDL5 484 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 PPM1EQ8WY54 764 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 WDR83Q9BRX9 315 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 FICDQ9BVA6 458 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 C2orf49Q9BVC5 232 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 TM6SF2Q9BZW4 377 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 POLR1EQ9GZS1 481 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 PRO3102Q9H379 93 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 RETREG1Q9H6L5 497 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 LRRC40Q9H9A6 602 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 KIF9Q9HAQ2 790 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 PDFQ9HBH1 243 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 PPANQ9NQ55 473 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 GDE1Q9NZC3 331 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 KIAA1522Q9P206 1035 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 SEPT3Q9UH03 358 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 VPS51Q9UID3 782 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MTCH2Q9Y6C9 303 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 DENND4CQ5VZ89 1909 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SDR42E2A6NKP2 422 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 SOBPA7XYQ1 873 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 POC1B-GALNT4F8VUJ3 575 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 H3BQF6 201 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TMCC1O94876 653 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ARSAP15289 507 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 GEMP55040 296 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 WNT3AP56704 352 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TNK2Q07912 1038 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 USP4Q13107 963 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 GRM2Q14416 872 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 DHCR24Q15392 516 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 PLEKHG6Q3KR16 790 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 LRIT3Q3SXY7 679 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 MPP7Q5T2T1 576 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 CERCAMQ5T4B2 595 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 NAPEPLDQ6IQ20 393 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 RETSATQ6NUM9 610 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 LRRC8BQ6P9F7 803 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 CES3Q6UWW8 571 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 PRPF39Q86UA1 669 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 RYBPQ8N488 228 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 PAF1Q8N7H5 531 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 OR6K2Q8NGY2 324 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 FIBINQ8TAL6 211 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 EPS8L3Q8TE67 593 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 PDCD6IPQ8WUM4 868 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 OSCP1Q8WVF1 389 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 MYLIPQ8WY64 445 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ASIC4Q96FT7 647 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 LRCH3Q96II8 777 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TTC25Q96NG3 672 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 MYADMQ96S97 322 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TBL1YQ9BQ87 522 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 KXD1Q9BQD3 176 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ACE2Q9BYF1 805 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 FRMD8Q9BZ67 464 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 SLC25A51Q9H1U9 297 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ZFP14Q9HCL3 533 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 EIF2B3Q9NR50 452 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 BFARQ9NZS9 450 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 SAMD15Q9P1V8 674 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TBK1Q9UHD2 729 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 CDH7Q9ULB5 785 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 NFS1Q9Y697 457 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 NYNRINQ9P2P1 1898 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 EXOC1LA0A1B0GW35 172 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ERI2A8K979 691 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 E7ESA3 106 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 POLR3GO15318 223 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 EIF3HO15372 352 aaKnown RBP eCLIP3.76□□□□□ -1.81
RTN4-208ENST00000404909 SMAD6O43541 496 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 OPA1O60313 960 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 SYF2O95926 243 aaKnown RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 CTSOP43234 321 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 CHRNA4P43681 627 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 RGRP47804 291 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 STK19P49842 368 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 GPX6P59796 221 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 RHOAP61586 193 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 CDH17Q12864 832 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 POU6F1Q14863 301 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ACCSLQ4AC99 568 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ATXN7L2Q5T6C5 722 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 KCTD11Q693B1 232 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 ASTLQ6HA08 431 aaPredicted RBP3.76□□□□□ -1.81
RTN4-208ENST00000404909 ZNF783Q6ZMS7 281 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 LINC00523Q86TU6 105 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 YAF2Q8IY57 180 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 KRT222Q8N1A0 295 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 TEX26Q8N6G2 289 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 DCAF4L2Q8NA75 395 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 FBF1Q8TES7 1133 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms