RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SDK2Q58EX2 2172 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CRYBG3Q68DQ2 2970 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CELSR2Q9HCU4 2923 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 A0A1W2PQM1 296 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TRIM49BA6NDI0 452 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 STX10O60499 249 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LEFTY1O75610 366 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TCEA3O75764 348 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ENDOD1O94919 500 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 UGT1A5P35504 534 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PRCPP42785 496 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PFN3P60673 137 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NUCB2P80303 420 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TMEM110Q86TL2 294 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DEFB106AQ8N104 65 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ATP6V0D2Q8N8Y2 350 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LIN37Q96GY3 246 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC2A13Q96QE2 648 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LRRC61Q9BV99 259 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 C1QTNF2Q9BXJ5 285 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 UPF2Q9HAU5 1272 aaKnown RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 POPDC2Q9HBU9 364 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ITM2BQ9Y287 266 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PCDHGA7Q9Y5G6 932 aa12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ARHGEF17Q96PE2 2063 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CLEC18AA5D8T8 446 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IGLON5A6NGN9 336 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 AGRPO00253 132 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TPP1O14773 563 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PLD2O14939 933 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 YY2O15391 372 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ADRB3P13945 408 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TFE3P19532 575 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 GKP32189 559 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ETV5P41161 510 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 MLLT3P42568 568 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ABL2P42684 1182 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SYKP43405 635 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FMO5P49326 533 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 YWHAZP63104 245 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TLE1Q04724 770 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 KCTD16Q68DU8 428 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 C22orf39Q6P5X5 142 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CLEC18BQ6UXF7 455 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 KRBA2Q6ZNG9 492 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 USP53Q70EK8 1073 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 WDTC1Q8N5D0 677 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ATP11CQ8NB49 1132 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CLEC18CQ8NCF0 446 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SEMA3CQ99985 751 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FUCA2Q9BTY2 467 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DDIT4Q9NX09 232 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CNTN6Q9UQ52 1028 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
SPTLC1P3-201ENST00000403408 LRP4O75096 1905 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CHD5Q8TDI0 1954 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 LMO7DNF2Z398 122 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PAGE1O75459 146 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 GRAP2O75791 330 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZMPSTE24O75844 475 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 GJB6O95452 261 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ADCY5O95622 1261 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CD160O95971 181 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ITGB2P05107 769 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TSHRP16473 764 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ITIH1P19827 911 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IGFALSP35858 605 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RABIFP47224 123 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RPS21P63220 83 aaKnown RBP12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CCL7P80098 99 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 STILQ15468 1287 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TCEA2Q15560 299 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PRRT3Q5FWE3 981 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RAB11FIP2Q7L804 512 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TMPRSS9Q7Z410 1059 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZFAND4Q86XD8 727 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms