RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 EID3Q8N140 333 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 REPS1Q96D71 796 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 FCRL2Q96LA5 508 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 KLHL28Q9NXS3 571 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 SMIM28A0A1B0GU29 152 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 C4BPAP04003 597 aaKnown RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 TMEM132CQ8N3T6 1108 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 STK32AQ8WU08 396 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 P2RY11Q96G91 374 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 DERAQ9Y315 318 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 CNOT3O75175 753 aaKnown RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 EML3Q32P44 896 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 ARHGAP28Q9P2N2 729 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 TLR5O60602 858 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ZFP1Q6P2D0 407 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 FUKQ8N0W3 1084 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 SPATA6LQ8N4H0 392 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PYDC1Q8WXC3 89 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PIK3R5Q8WYR1 880 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 DDX3YO15523 660 aaKnown RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 CATP04040 527 aaKnown RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ANXA5P08758 320 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 TKTP29401 623 aaKnown RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 GSSP48637 474 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 RAB10P61026 200 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 MRPS22P82650 360 aaKnown RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PFKPQ01813 784 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PTPRNQ16849 979 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 POM121L1PQ3SYA9 428 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 SELENOMQ8WWX9 145 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ASAH2Q9NR71 780 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 COL1A2P08123 1366 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 IGLV3-22A0A075B6J6 115 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 CLOCKO15516 846 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PAX3P23760 479 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 FLT3LGP49771 235 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ZNF557Q8N988 423 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 DDHD1Q8NEL9 900 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 MAGEB10Q96LZ2 347 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ACE2Q9BYF1 805 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 SEMA6AQ9H2E6 1030 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 VPS51Q9UID3 782 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 FAM220BPB1ANY3 271 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PEX11AO75192 247 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 RPN2P04844 631 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 FLT3P36888 993 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 MAPK9P45984 424 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 FKBP1BP68106 108 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 SLC25A3Q00325 362 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 IRF8Q02556 426 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 TRIP4Q15650 581 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-204ENST00000400337 TRIM16LQ309B1 348 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 PLEKHA7Q6IQ23 1121 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 AFTPHQ6ULP2 937 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 TNS4Q8IZW8 715 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 ELMO1Q92556 727 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■■■■□ 20.5
COL18A1-204ENST00000400337 FBXO10Q9UK96 956 aa18.38■□□□□ 0.53
COL18A1-204ENST00000400337 C3P01024 1663 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ATG7O95352 703 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 TSPAN8P19075 237 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 CLK2P49760 499 aaKnown RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 SMAD3P84022 425 aaKnown RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 PSMD5Q16401 504 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ACMSDQ8TDX5 336 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 UGT2B28Q9BY64 529 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 R3HDM2Q9Y2K5 976 aaKnown RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 CILPO75339 1184 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 MTA2O94776 668 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ITFG1Q8TB96 612 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 GNPTGQ9UJJ9 305 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 INVSQ9Y283 1065 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 HS6ST1O60243 411 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 SERPINI2O75830 405 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ZMPSTE24O75844 475 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 TTPAP49638 278 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ELF3P78545 371 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 XRCC4Q13426 336 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 XYLT1Q86Y38 959 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 SLCO1B3Q9NPD5 702 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 TUSC3Q13454 348 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 GALNT3Q14435 633 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 MARK2Q7KZI7 788 aaKnown RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 SNRNP27Q8WVK2 155 aaKnown RBP18.37■□□□□ 0.53
COL18A1-204ENST00000400337 MBOAT7Q96N66 472 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 ATP13A3Q9H7F0 1226 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 LRCH1Q9Y2L9 728 aa18.37■□□□□ 0.53
COL18A1-204ENST00000400337 A0A1W2PPM1 405 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 BBS4Q96RK4 519 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 NIFKQ9BYG3 293 aaKnown RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 USP2O75604 605 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 SOX6P35712 828 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms