RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 HSD17B12Q53GQ0 312 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 INO80DQ53TQ3 878 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZC3H12BQ5HYM0 836 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 FAM102AQ5T9C2 384 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 LCN1P1Q5VSP4 162 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SLC47A2Q86VL8 602 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 GATAD2AQ86YP4 633 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 LPGAT1Q92604 370 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 C8orf48Q96LL4 319 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ANKRD60Q9BZ19 345 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SPATA2Q9UM82 520 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 HTRA2O43464 458 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ORC5O43913 435 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TIPRLO75663 272 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ATG7O95352 703 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DBTP11182 482 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 MYF6P23409 242 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SLC5A2P31639 672 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NUDT1P36639 197 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NR2C2P49116 596 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 HLCSP50747 726 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 RHDQ02161 417 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 CUL2Q13617 745 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 RBBP7Q16576 425 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DCAF15Q66K64 600 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NEPROQ6NW34 567 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TMEM179Q6ZVK1 233 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ERMP1Q7Z2K6 904 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PIWIL4Q7Z3Z4 852 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PCDH20Q8N6Y1 951 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TFB1MQ8WVM0 346 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF669Q96BR6 464 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DNAJC19Q96DA6 116 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TMEM246Q9BRR3 403 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TDRD1Q9BXT4 1180 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SPRTNQ9H040 489 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 CAB39LQ9H9S4 337 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 FARSBQ9NSD9 589 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 AURKAO14965 403 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 CD4P01730 458 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 UGT3A1Q6NUS8 523 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 KBTBD6Q86V97 674 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ANKFN1Q8N957 763 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NSUN4Q96CB9 384 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TBCBQ99426 244 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PKP2Q99959 881 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZSCAN5AQ9BUG6 496 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 MND1Q9BWT6 205 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 MROQ9BYG7 248 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TMEM168Q9H0V1 697 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 AASDHPPTQ9NRN7 309 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NRBP2Q9NSY0 501 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PLCL2Q9UPR0 1127 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 CPQQ9Y646 472 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TCP10L2B9ZVM9 353 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SLC37A4O43826 429 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 HUS1O60921 280 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ADRA2BP18089 450 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 NELFEP18615 380 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 LDLRAP1Q5SW96 308 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SDE2Q6IQ49 451 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 MFSD7Q6UXD7 560 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF540Q8NDQ6 660 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SNX18Q96RF0 628 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 A0A096LPK6 155 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 DENND3A2RUS2 1198 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 C12orf71A8MTZ7 269 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 TFECO14948 347 aaPredicted RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 USP12O75317 370 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 DCKP27707 260 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 PPP5CP53041 499 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 IMPG1Q17R60 797 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 RASSF6Q6ZTQ3 369 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 BBS12Q6ZW61 710 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 FAM160B2Q86V87 743 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SLC15A4Q8N697 577 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 FAM213AQ9BRX8 229 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 CCDC32Q9BV29 185 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 LIN28AQ9H9Z2 209 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF304Q9HCX3 659 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZMAT5Q9UDW3 170 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 MLXQ9UH92 298 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 LEF1Q9UJU2 399 aaPredicted RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SNCAIPQ9Y6H5 919 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 CABYRO75952 493 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 APBA3O96018 575 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 GM2AP17900 193 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 CLK3P49761 638 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ETV1P50549 477 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 MGAT5BQ3V5L5 792 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 HIPK1Q86Z02 1210 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 HDAC2Q92769 488 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZUFSPQ96AP4 578 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms