RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 FAM124AQ86V42 546 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 CTAGE4Q8IX94 777 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 ABCA7Q8IZY2 2146 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 ACTRT1Q8TDG2 376 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 OR8D1Q8WZ84 308 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 CCDC114Q96M63 670 aa17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 NAP1L3Q99457 506 aaPredicted RBP17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
SMIM11A-202ENST00000399295 ZNF292O60281 2723 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 THADAQ6YHU6 1953 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 EFCAB8A8MWE9 144 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 MCF2LO15068 1137 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 IL1BP01584 269 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 ERCC2P18074 760 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CXCR5P32302 372 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 SLC8A1P32418 973 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 PTGER3P43115 390 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 PSMD8P48556 350 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 PEX5P50542 639 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 DNA2P51530 1060 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 NDST2P52849 883 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CREB5Q02930 508 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 LMNB2Q03252 620 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 SPEM2Q0P670 501 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CSRP2Q16527 193 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 POLNQ7Z5Q5 900 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CPNE8Q86YQ8 564 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 RASGEF1CQ8N431 466 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 GANCQ8TET4 914 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 COG1Q8WTW3 980 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 HMCESQ96FZ2 354 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CAPZA3Q96KX2 299 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 GPR174Q9BXC1 333 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 CEP44Q9C0F1 390 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 FBXL12Q9NXK8 326 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 NCKAP1Q9Y2A7 1128 aa17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 FARP1Q9Y4F1 1045 aaPredicted RBP17.81■□□□□ 0.44
SMIM11A-202ENST00000399295 BCLAF3A2AJT9 711 aaKnown RBP17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 ZSCAN5CA6NGD5 496 aaPredicted RBP17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 ZNF185O15231 689 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 ALOX15BO15296 676 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 MID1O15344 667 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 ADH1BP00325 375 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 C5AR1P21730 350 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 GJC1P36383 396 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 RECQLP46063 649 aaPredicted RBP17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 DPYSQ14117 519 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 KRT81Q14533 505 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 LYSMD4Q5XG99 296 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 C22orf39Q6P5X5 142 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 LEKR1Q6ZMV7 388 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 USP30Q70CQ3 517 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 OR2A12Q8NGT7 310 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 CELF6Q96J87 481 aaKnown RBP17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 OMDQ99983 421 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 TNKS2Q9H2K2 1166 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 LRRC19Q9H756 370 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 PCDH18Q9HCL0 1135 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 PPM1HQ9ULR3 514 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 ACTL7AQ9Y615 435 aa17.8■□□□□ 0.44
SMIM11A-202ENST00000399295 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CEP104O60308 925 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ZNF821O75541 412 aaPredicted RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 RNASEH2AO75792 299 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CD160O95971 181 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 KRT7P08729 469 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 TGM1P22735 817 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 AMPD1P23109 780 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ACSL1P33121 698 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 MPLP40238 635 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CETN2P41208 172 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CDH6P55285 790 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 TAS2R40P59535 323 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ZNF33AQ06730 810 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 SERINC3Q13530 473 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CCDC6Q16204 474 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ATP13A4Q4VNC1 1196 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 SEL1L2Q5TEA6 688 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 FAM46CQ5VWP2 391 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CYP2U1Q7Z449 544 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 KIAA2013Q8IYS2 634 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 HDDC3Q8N4P3 179 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 LZTR1Q8N653 840 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 PCDH20Q8N6Y1 951 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CADM4Q8NFZ8 388 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 FOXJ1Q92949 421 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ISG20Q96AZ6 181 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 ZNF419Q96HQ0 510 aaPredicted RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 HSPA12BQ96MM6 686 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 CSPG4P5Q96PW8 444 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 SLC39A8Q9C0K1 460 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 KLC2Q9H0B6 622 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 BTBD1Q9H0C5 482 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 PARD6AQ9NPB6 346 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 SEMA4GQ9NTN9 838 aa17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 DDX56Q9NY93 547 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 FCF1Q9Y324 198 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-202ENST00000399295 GON4LQ3T8J9 2241 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms