RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 PLPP6Q8IY26 295 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 LGI2Q8N0V4 545 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 OR52K1Q8NGK4 314 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 CELF6Q96J87 481 aaKnown RBP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 RPRD1AQ96P16 312 aaPredicted RBP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 FCRL3Q96P31 734 aaPredicted RBP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 NUDCD1Q96RS6 583 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 TLR9Q9NR96 1032 aa6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 RBM22Q9NW64 420 aaKnown RBP eCLIP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 ZFP37Q9Y6Q3 630 aaPredicted RBP6.94□□□□□ -1.3
CX3CR1-202ENST00000399220 TLDC2A0PJX2 215 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 BIRC5O15392 142 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CXCL14O95715 111 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CD160O95971 181 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 EN2P19622 333 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CD9P21926 228 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 GP5P40197 560 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 SLCO1A2P46721 670 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 EFTUD2Q15029 972 aaKnown RBP eCLIP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 TMED2Q15363 201 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 DCAF4L2Q8NA75 395 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ZNF473Q8WTR7 871 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 OTUB2Q96DC9 234 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CCT8L2Q96SF2 557 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 RBBP8Q99708 897 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 HTATIP2Q9BUP3 242 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 POLR1EQ9GZS1 481 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 SEPT3Q9UH03 358 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 NUDT5Q9UKK9 219 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CORO1CQ9ULV4 474 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 BRCA2P51587 3418 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 GOLGA6L7A0A1B0GV03 622 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 J3KR12 359 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 RASSF9O75901 435 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 LUC7L3O95232 432 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 WISP3O95389 354 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 GLUD1P00367 558 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 PENKP01210 267 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 FGF1P05230 155 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 INHBAP08476 426 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 KRT15P19012 456 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 IBSPP21815 317 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 OR1E1P30953 314 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ATP1A2P50993 1020 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 LIMK2P53671 638 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ERVFC1P60507 584 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 RPL26P61254 145 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ZXDBP98169 803 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 IHHQ14623 411 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 TTC31Q49AM3 519 aaPredicted RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 TMEM184AQ6ZMB5 413 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 OTOP2Q7RTS6 562 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 MIB1Q86YT6 1006 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ELMOD1Q8N336 334 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 OR6Y1Q8NGX8 325 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ZNF398Q8TD17 642 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 NSMCE1Q8WV22 266 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 ISG20Q96AZ6 181 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 AGAP3Q96P47 875 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 TRPC7Q9HCX4 862 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 BCCIPQ9P287 314 aaKnown RBP eCLIP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 RPL26L1Q9UNX3 145 aaKnown RBP6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 C2orf16Q68DN1 1984 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 PCNTO95613 3336 aa6.93□□□□□ -1.3
CX3CR1-202ENST00000399220 COL4A2P08572 1712 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 TRAV19A0A0A6YYK7 116 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 A0A1W2PPM1 405 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 CCDC189A1A4V9 331 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 HEATR9A2RTY3 570 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 FZD6O60353 706 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 TGDSO95455 350 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 MOCS2O96007 188 aaPredicted RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 MYCP01106 439 aaPredicted RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 LRG1P02750 347 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 C8AP07357 584 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 COL6A2P12110 1019 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 CREB1P16220 341 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 HPDP32754 393 aaPredicted RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 IL9RQ01113 521 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 SLC10A7Q0GE19 358 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 SPARCL1Q14515 664 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 CYTH1Q15438 398 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 SLC1A5Q15758 541 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 MPPE1Q53F39 396 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 TMCO2Q7Z6W1 182 aaPredicted RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 BBS5Q8N3I7 341 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 FIBINQ8TAL6 211 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 LRRN4Q8WUT4 740 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 DEPDC1BQ8WUY9 529 aa6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 MRPS31Q92665 395 aaKnown RBP6.92□□□□□ -1.3
CX3CR1-202ENST00000399220 SERAC1Q96JX3 654 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms