RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FAM72CH0Y354 149 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 H0Y8X5 98 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 CCP110O43303 1012 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 PCDHGA12O60330 932 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 DKK1O94907 266 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 ZIC2O95409 532 aaPredicted RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 SERPINC1P01008 464 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 WNT1P04628 370 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 L1CAMP32004 1257 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 GEMIN4P57678 1058 aaKnown RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 RPL7AP62424 266 aaKnown RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 TPM4P67936 248 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 ARF5P84085 180 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 ASIC2Q16515 512 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 INAVAQ3KP66 663 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 ARSIQ5FYB1 569 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 EFHC2Q5JST6 749 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 PIP5KL1Q5T9C9 394 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 FAM72AQ5TYM5 149 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 NAPEPLDQ6IQ20 393 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 FAM72DQ6L9T8 149 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 DPY19L3Q6ZPD9 716 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 TMPRSS7Q7RTY8 843 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 FAM72BQ86X60 149 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 CHST14Q8NCH0 376 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 BAHD1Q8TBE0 780 aaPredicted RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 RHBDD1Q8TEB9 315 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 ARHGEF2Q92974 986 aaKnown RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 PPP1R16AQ96I34 528 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 LRIG1Q96JA1 1093 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 CDC6Q99741 560 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 CNPY3Q9BT09 278 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 SYT11Q9BT88 431 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 FUCA2Q9BTY2 467 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 MAGEH1Q9H213 219 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 NDFIP2Q9NV92 336 aa13.68□□□□□ -0.22
VCX3A-202ENST00000398729 APOBEC2Q9Y235 224 aaKnown RBP13.68□□□□□ -0.22
VCX3A-202ENST00000398729 A0A1B0GTQ1 180 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 A0A1W2PR77 199 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 WNT9AO14904 365 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 RAMP2O60895 175 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ZNF821O75541 412 aaPredicted RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 LEFTY1O75610 366 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ACVRL1P37023 503 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 GRK6P43250 576 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 DNA2P51530 1060 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 AIF1P55008 147 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 TAS2R38P59533 333 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 IQCB1Q15051 598 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 POLD3Q15054 466 aaPredicted RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 SETMARQ53H47 684 aaPredicted RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 CARD16Q5EG05 197 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 SFMBT2Q5VUG0 894 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 NEK5Q6P3R8 708 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ERN2Q76MJ5 926 aaKnown RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 MFSD2AQ8NA29 543 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ARRDC3Q96B67 414 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ELF4Q99607 663 aaPredicted RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 EPAS1Q99814 870 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 HEPHQ9BQS7 1158 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 GDF3Q9NR23 364 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 TAS2R14Q9NYV8 317 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 FCF1Q9Y324 198 aaKnown RBP13.67□□□□□ -0.22
VCX3A-202ENST00000398729 MAST4O15021 2626 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 CHD5Q8TDI0 1954 aa13.67□□□□□ -0.22
VCX3A-202ENST00000398729 SYCE3A1L190 88 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 PRAMEF26H0Y7S4 382 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 TLR4O00206 839 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 YKT6O15498 198 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 CREB3O43889 395 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 MAGEC1O60732 1142 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 RNGTTO60942 597 aaKnown RBP13.66□□□□□ -0.22
VCX3A-202ENST00000398729 EPHB2P29323 1055 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
VCX3A-202ENST00000398729 IL9RQ01113 521 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 OVGP1Q12889 678 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 STAT4Q14765 748 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 TMC6Q7Z403 805 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
VCX3A-202ENST00000398729 ISG20Q96AZ6 181 aaKnown RBP13.66□□□□□ -0.22
VCX3A-202ENST00000398729 CRELD1Q96HD1 420 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 HDAC8Q9BY41 377 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 EDEM3Q9BZQ6 932 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 TM6SF2Q9BZW4 377 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms