RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDHR5Q9HBB8 845 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 STMN3Q9NZ72 180 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 NAALADL1Q9UQQ1 740 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 SLC9A8Q9Y2E8 581 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 PRLRP16471 622 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 HTR1BP28222 390 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 TNFSF9P41273 254 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ATP12AP54707 1039 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DLG4P78352 724 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 GFM2Q969S9 779 aaKnown RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 VPS33AQ96AX1 596 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 POLR1EQ9GZS1 481 aaKnown RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM153AQ9UHL3 310 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF510Q9Y2H8 683 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF536O15090 1300 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A1B0GW55 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ANKDD1BA6NHY2 528 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 AP5Z1O43299 807 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 HS6ST1O60243 411 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L2P0CJ85 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L3P0CJ86 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L4P0CJ87 422 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L5P0CJ88 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L6P0CJ89 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4L7P0CJ90 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 SKP1P63208 163 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF618Q5T7W0 954 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 NPNTQ6UXI9 565 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 TOP6BLQ8N6T0 577 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 NIFKQ9BYG3 293 aaKnown RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 TXNRD2Q9NNW7 524 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 BLOC1S4Q9NUP1 217 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DUX4Q9UBX2 424 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ENTPD4Q9Y227 616 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 SLCO1B7G3V0H7 640 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 CNOT3O75175 753 aaKnown RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 CCNE2O96020 404 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 NQO1P15559 274 aaKnown RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 HNF4AP41235 474 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 SPANXN3Q5MJ09 141 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 BTBD9Q96Q07 612 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ADI1Q9BV57 179 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 KLHL3Q9UH77 587 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 RGPD2P0DJD1 1756 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A088AWK7 358 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 H3BN98 237 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 OR6A2O95222 327 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF10P21506 573 aaPredicted RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 PRKAG1P54619 331 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 KCNT2Q6UVM3 1135 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF621Q6ZSS3 439 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ZCCHC23Q6ZST2 131 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 PANX3Q96QZ0 392 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ARL15Q9NXU5 204 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 SAE1Q9UBE0 346 aaPredicted RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 MAFBQ9Y5Q3 323 aaPredicted RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 NPR3P17342 541 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 MIPP30301 263 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 TRIM25Q14258 630 aaKnown RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 LRRN4CLQ8ND94 238 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 MRPL48Q96GC5 212 aaKnown RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 HGH1Q9BTY7 390 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 NMRAL1Q9HBL8 299 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 VTI1BQ9UEU0 232 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ADAM28Q9UKQ2 775 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 CD86P42081 329 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 FUT10Q6P4F1 479 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 MFSD7Q6UXD7 560 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 KCNK18Q7Z418 384 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 RNF148Q8N7C7 305 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 LENG9Q96B70 501 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 REPS1Q96D71 796 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 TCF7L2Q9NQB0 619 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A096LPK6 155 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 CLDN5O00501 218 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 INPP4BO15327 924 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 LYPLA2O95372 231 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 HLA-DQA2P01906 255 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 APODP05090 189 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ETS1P14921 441 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 GRK2P25098 689 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 HSPA14Q0VDF9 509 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 FASTKQ14296 549 aaKnown RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 IL27RAQ6UWB1 636 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ISLR2Q6UXK2 745 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ZBTB49Q6ZSB9 765 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 HDDC2Q7Z4H3 204 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 OR56A4Q8NGH8 313 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 SNRNP27Q8WVK2 155 aaKnown RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ING5Q8WYH8 240 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 TBCDQ9BTW9 1192 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 PRRG3Q9BZD7 231 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 PEX1O43933 1283 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 ATG7O95352 703 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 C15orf59Q2T9L4 293 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms