RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 POMPQ9Y244 141 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KANSL1LA0AUZ9 987 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 HEATR9A2RTY3 570 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NBNO60934 754 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NFKBIAP25963 317 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CSRP3P50461 194 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CCNA1P78396 465 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AMHR2Q16671 573 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 XKR4Q5GH76 650 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PGAM4Q8N0Y7 254 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FATE1Q969F0 183 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 BORCS5Q969J3 196 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TUBGCP3Q96CW5 907 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CERS2Q96G23 380 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CSPG4P5Q96PW8 444 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 WRNIP1Q96S55 665 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C17orf80Q9BSJ5 609 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C1orf50Q9BV19 199 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 IL22Q9GZX6 179 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SPATC1LQ9H0A9 340 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PLAC1Q9HBJ0 212 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TCF7L2Q9NQB0 619 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AP4E1Q9UPM8 1137 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 COQ6Q9Y2Z9 468 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 GMEB1Q9Y692 573 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DCXO43602 365 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ALDOAP04075 364 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 KCNE1P15382 129 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PAMP19021 973 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SEMA3BQ13214 749 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PID1Q7Z2X4 250 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MAELQ96JY0 434 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TSGA13Q96PP4 275 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 OSBPL6Q9BZF3 934 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 UNKQ9C0B0 810 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MUC13Q9H3R2 512 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DNAJC25-GNG10A0A024R161 153 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PCP4L1A6NKN8 68 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TRPC5OSA6NMA1 111 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CSH1P0DML2 217 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CSH2P0DML3 217 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AMPD1P23109 780 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LRPAP1P30533 357 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NOS2P35228 1153 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 GLRBP48167 497 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ADAM17P78536 824 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MBTD1Q05BQ5 628 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C6orf183Q5T699 404 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RWDD4Q6NW29 188 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 GALNT7Q86SF2 657 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 HNRNPABQ99729 332 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ARNT2Q9HBZ2 717 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PCDH12Q9NPG4 1184 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ST14Q9Y5Y6 855 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SIN3BO75182 1162 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ETFBP38117 255 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AQP4P55087 323 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 KCNK10P57789 538 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ARPC4P59998 168 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 KLF10Q13118 480 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LSAMPQ13449 338 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SPIDRQ14159 915 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LDLRAP1Q5SW96 308 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FAM182BQ5T319 152 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PTAR1Q7Z6K3 402 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DHFR2Q86XF0 187 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 EMC1Q8N766 993 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 STYXQ8WUJ0 223 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TWNKQ96RR1 684 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 UHRF1Q96T88 793 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DTLQ9NZJ0 730 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NCKIPSDQ9NZQ3 722 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FZD9O00144 591 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PFDN6O15212 129 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RGS5O15539 181 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CACNG3O60359 315 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LYPLA1O75608 230 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ATP6V1B2P21281 511 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ME2P23368 584 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TCF7P36402 384 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RUNX1T1Q06455 604 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NIPAL4Q0D2K0 466 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CDH17Q12864 832 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DGUOKQ16854 277 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 THOC7Q6I9Y2 204 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 NEK10Q6ZWH5 1172 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TTC30AQ86WT1 665 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ERO1BQ86YB8 467 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SYTL1Q8IYJ3 562 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 BEST2Q8NFU1 509 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CHID1Q9BWS9 393 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FSD1LQ9BXM9 530 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 HAPLN2Q9GZV7 340 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 POLR1BQ9H9Y6 1135 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms