RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MLPHQ9BV36 600 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 PHF7Q9BWX1 381 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 SLC2A11Q9BYW1 496 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 CIPCQ9C0C6 399 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 PRDM6Q9NQX0 595 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ATP8A1Q9Y2Q0 1164 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 COL6A3P12111 3177 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 USP12O75317 370 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 GJA4P35212 333 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 GRIA1P42261 906 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 SOX9P48436 509 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 PRPSAP1Q14558 356 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 MBLAC2Q68D91 279 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 PTCRAQ6ISU1 281 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ADIPOR2Q86V24 386 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ETFBKMTQ8IXQ9 262 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ATP11CQ8NB49 1132 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 CYB5D2Q8WUJ1 264 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 APOL2Q9BQE5 337 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 DEC1Q9P2X7 70 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 MIA3Q5JRA6 1907 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 AVILO75366 819 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 PMPCBO75439 489 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 BANF1O75531 89 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 ASGR2P07307 311 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 CISD3P0C7P0 127 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 POLR2EP19388 210 aaKnown RBP21.52■■□□□ 1.04
CPNE1-204ENST00000397443 CD86P42081 329 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 RGRP47804 291 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 PLK1P53350 603 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 NIPAL4Q0D2K0 466 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 PCSK7Q16549 785 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 HOOK3Q86VS8 718 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 AHI1Q8N157 1196 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 SEMA3CQ99985 751 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 TM6SF2Q9BZW4 377 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 POLR1EQ9GZS1 481 aaKnown RBP21.52■■□□□ 1.04
CPNE1-204ENST00000397443 FBXO10Q9UK96 956 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 MYO10Q9HD67 2058 aa21.52■■□□□ 1.04
CPNE1-204ENST00000397443 SCNN1BP51168 640 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 RHOAP61586 193 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 RFTN1Q14699 578 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ITPRIPL2Q3MIP1 535 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 GRAMD4Q6IC98 578 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ZCCHC9Q8N567 271 aaKnown RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 EIF1ADQ8N9N8 165 aaKnown RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 IPMKQ8NFU5 416 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 FCRL5Q96RD9 977 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 KCNK12Q9HB15 430 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ARFGAP3Q9NP61 516 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 BNIP3LO60238 219 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 SERPINH1P50454 418 aaKnown RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ECT2LQ008S8 904 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 DHX9Q08211 1270 aaKnown RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 SMAD2Q15796 467 aaKnown RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ACCSLQ4AC99 568 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 BEND6Q5SZJ8 279 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 FNBP1LQ5T0N5 605 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ATXN7L2Q5T6C5 722 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-204ENST00000397443 EMBQ6PCB8 327 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 SFTPA1Q8IWL2 248 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 ZBTB9Q96C00 473 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 PSKH2Q96QS6 385 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 SLC25A51Q9H1U9 297 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 TNKS2Q9H2K2 1166 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 SLC25A13Q9UJS0 675 aa21.51■■□□□ 1.03
CPNE1-204ENST00000397443 COL4A3Q01955 1670 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 ARNTLO00327 626 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 NDC80O14777 642 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 IL9P15248 144 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 HIF1AQ16665 826 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 LEXMQ3ZCV2 418 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 PRPF39Q86UA1 669 aaKnown RBP21.5■■□□□ 1.03
CPNE1-204ENST00000397443 NXPE3Q969Y0 559 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 SLCO3A1Q9UIG8 710 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 TICRRQ7Z2Z1 1910 aa21.5■■□□□ 1.03
CPNE1-204ENST00000397443 ANXA9O76027 345 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 TPSB2P20231 275 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 OPRD1P41143 372 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 TPSAB1Q15661 275 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 MSS51Q4VC12 460 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 OR6K2Q8NGY2 324 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 ARRDC2Q8TBH0 407 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 CSGALNACT1Q8TDX6 532 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 CHFRQ96EP1 664 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 IMP4Q96G21 291 aaKnown RBP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 SERPINB12Q96P63 405 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 MGME1Q9BQP7 344 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 FAM129AQ9BZQ8 928 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 SAYSD1Q9NPB0 183 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 LHX3Q9UBR4 397 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 PRRT4C9JH25 899 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 AP2A1O95782 977 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 MMP2P08253 660 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 SRCP12931 536 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 MAGEA6P43360 314 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 ARL4CP56559 192 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 GEMIN4P57678 1058 aaKnown RBP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 PDIA2Q13087 525 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms