RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ERI2A8K979 691 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 TRIM24O15164 1050 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ECI2O75521 394 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 BANF1O75531 89 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 SASH3O75995 380 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MT-CO1P00395 513 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MMP2P08253 660 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PABPC1P11940 636 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PSMC3P17980 439 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 LMAN1P49257 510 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PMS2P54278 862 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 DSC2Q02487 901 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 OLIG2Q13516 323 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PRPSAP1Q14558 356 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 FASTKD3Q14CZ7 662 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 INO80DQ53TQ3 878 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 UBAP2Q5T6F2 1119 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PPP1R21Q6ZMI0 780 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 HDXQ7Z353 690 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 C12orf40Q86WS4 652 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 AGGF1Q8N302 714 aaeCLIP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MGME1Q9BQP7 344 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 WDR83Q9BRX9 315 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 UBE2ZQ9H832 354 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ECT2Q9H8V3 914 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MAP2K7O14733 419 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 GJB3O75712 270 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 CISD3P0C7P0 127 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 KCNA5P22460 613 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 HSD17B3P37058 310 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 GPR153Q6NV75 609 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 CENPUQ71F23 418 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 ETFBKMTQ8IXQ9 262 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 PDIK1LQ8N165 341 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 TADA1Q96BN2 335 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 GUCD1Q96NT3 240 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 POLR1EQ9GZS1 481 aaKnown RBP27.93■■■□□ 2.06
CPNE1-203ENST00000397442 CDC42EP4Q9H3Q1 356 aaKnown RBP27.93■■■□□ 2.06
CPNE1-203ENST00000397442 SAYSD1Q9NPB0 183 aa27.93■■■□□ 2.06
CPNE1-203ENST00000397442 AAR2Q9Y312 384 aaKnown RBP27.93■■■□□ 2.06
CPNE1-203ENST00000397442 TTC24A2A3L6 582 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-203ENST00000397442 ANXA9O76027 345 aa27.92■■■□□ 2.06
CPNE1-203ENST00000397442 TMCC1O94876 653 aa27.92■■■□□ 2.06
CPNE1-203ENST00000397442 RGRP47804 291 aa27.92■■■□□ 2.06
CPNE1-203ENST00000397442 PDIA2Q13087 525 aaKnown RBP27.92■■■□□ 2.06
CPNE1-203ENST00000397442 ADIPOR2Q86V24 386 aa27.92■■■□□ 2.06
CPNE1-203ENST00000397442 CINPQ9BW66 212 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-203ENST00000397442 CXorf51AA0A1B0GTR3 108 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 ALOX15BO15296 676 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 EIF3HO15372 352 aaKnown RBP eCLIP27.91■■■□□ 2.068e-7■■□□□ 13.6
CPNE1-203ENST00000397442 SP100P23497 879 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-203ENST00000397442 MAGEA4P43358 317 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 ITKQ08881 620 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 RETSATQ6NUM9 610 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 CEP128Q6ZU80 1094 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 BBS5Q8N3I7 341 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 PPP1R2P1Q96PQ5 205 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 XAB2Q9HCS7 855 aaKnown RBP27.91■■■□□ 2.06
CPNE1-203ENST00000397442 ANHXE9PGG2 379 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 K7ERQ8 282 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 USP12O75317 370 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 CR2P20023 1033 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 CTSOP43234 321 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-203ENST00000397442 GEMP55040 296 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 HTR4Q13639 388 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 TMEM215Q68D42 235 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 LRRC8BQ6P9F7 803 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 KDELC1Q6UW63 502 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 SEMA3CQ99985 751 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 PABPC3Q9H361 631 aaKnown RBP27.91■■■□□ 2.06
CPNE1-203ENST00000397442 LRRC40Q9H9A6 602 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 LHX3Q9UBR4 397 aa27.91■■■□□ 2.06
CPNE1-203ENST00000397442 PSMD3O43242 534 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 MBTPS2O43462 519 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 MLNP12872 115 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 ADRA1AP35348 466 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 CD86P42081 329 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 SERPINH1P50454 418 aaKnown RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 SARNPP82979 210 aaKnown RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 SMAD4Q13485 552 aaKnown RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 DMC1Q14565 340 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 GEN1Q17RS7 908 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 BBS9Q3SYG4 887 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 SPDYCQ5MJ68 293 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 HP1BP3Q5SSJ5 553 aaPredicted RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 MTSS1LQ765P7 747 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 YAF2Q8IY57 180 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 ZBED8Q8IZ13 594 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 MRGPRX2Q96LB1 330 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 C9orf72Q96LT7 481 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 NSMCE3Q96MG7 304 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 XPO6Q96QU8 1125 aaKnown RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 NINJ2Q9NZG7 142 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 FCF1Q9Y324 198 aaKnown RBP27.9■■■□□ 2.06
CPNE1-203ENST00000397442 NUMBLQ9Y6R0 609 aa27.9■■■□□ 2.06
CPNE1-203ENST00000397442 UNC80Q8N2C7 3258 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 GOLGA6CA6NDK9 693 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 GOLGA6BA6NDN3 693 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 SMAD6O43541 496 aaKnown RBP27.89■■■□□ 2.06
CPNE1-203ENST00000397442 TULP3O75386 442 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms