RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 DBX2Q6ZNG2 339 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 IQCHQ86VS3 1027 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 TRIM69Q86WT6 500 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 PYROXD2Q8N2H3 581 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 ZCCHC9Q8N567 271 aaKnown RBP11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 ARFGAP1Q8N6T3 406 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 OR14C36Q8NHC7 312 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 PPP1R16AQ96I34 528 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 SLC32A1Q9H598 525 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 ARHGAP20Q9P2F6 1191 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 IL36AQ9UHA7 158 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 PCDHGB2Q9Y5G2 931 aa11.31□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3DA0A087WVF3 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3IA0A087WXS9 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3EA0A087X179 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3KA0A087X1G2 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 SSU72P8A0A1W2PR75 194 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3FA6NER0 549 aaPredicted RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3LB9A6J9 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 VILLO15195 856 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 CREB3O43889 395 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 POP4O95707 220 aaKnown RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 GSRP00390 522 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 CTSLP07711 333 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TPM1P09493 284 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3HP0C7X1 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 GLDCP23378 1020 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 MIPP30301 263 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 ACVRL1P37023 503 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 MAPK8P45983 427 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TPI1P60174 286 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 SNRPD1P62314 119 aaKnown RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 ZNF252P-AS1Q0IIN9 211 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 SERINC3Q13530 473 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 COL9A2Q14055 689 aaPredicted RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3GQ6DHY5 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3CQ6IPX1 549 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 DPY19L3Q6ZPD9 716 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 PRPF39Q86UA1 669 aaKnown RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TBC1D3Q8IZP1 549 aaPredicted RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 LZTR1Q8N653 840 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 TEKT4Q8WW24 435 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 GTPBP2Q9BX10 602 aaKnown RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 OSBPL1AQ9BXW6 950 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 LRRC19Q9H756 370 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
NDUFA9-202ENST00000396655 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 FAM47DPA6NHR8 397 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 RASA4BC9J798 803 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 MYO1FO00160 1098 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 RASA4O43374 803 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 AP1G1O43747 822 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 MAGEC1O60732 1142 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 CD59P13987 128 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 ITGB7P26010 798 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 NUMBP49757 651 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 DPYSL2Q16555 572 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 HLA-BQ31612 363 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 UAP1L1Q3KQV9 507 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 SETMARQ53H47 684 aaPredicted RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 PIP5KL1Q5T9C9 394 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 AFMIDQ63HM1 303 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 RFX8Q6ZV50 586 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 CYP4V2Q6ZWL3 525 aaPredicted RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 ERN2Q76MJ5 926 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 MFSD2AQ8NA29 543 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 HCAR2Q8TDS4 363 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 SNX19Q92543 992 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 RAB7BQ96AH8 199 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 CPEB1Q9BZB8 566 aaKnown RBP11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 TRIM7Q9C029 511 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
NDUFA9-202ENST00000396655 DHX35Q9H5Z1 703 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms