RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 LHX3Q9UBR4 397 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 TRIM10Q9UDY6 481 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 IL36AQ9UHA7 158 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 NCKAP1Q9Y2A7 1128 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 PCDHGA5Q9Y5G8 931 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 NUMA1Q14980 2115 aa18.08■□□□□ 0.48
TNFSF13-204ENST00000396542 EP300Q09472 2414 aaPredicted RBP18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 GVINP1Q7Z2Y8 2422 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 GRID2IPA4D2P6 1211 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 C10orf142B7Z368 130 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 RNF103O00237 685 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 MAFKO60675 156 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 NDUFS2O75306 463 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 PEX11BO96011 259 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 MARCKSL1P49006 195 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 RHOAP61586 193 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 SNRPD1P62314 119 aaKnown RBP18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 GALNT2Q10471 571 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 RFTN1Q14699 578 aaPredicted RBP18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 SLC9A4Q6AI14 798 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 FAM124AQ86V42 546 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 LRRC49Q8IUZ0 686 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 SLC41A1Q8IVJ1 513 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 HDDC3Q8N4P3 179 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 KIAA1524Q8TCG1 905 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 LRIG1Q96JA1 1093 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 GDAP1L1Q96MZ0 367 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 ZNF599Q96NL3 588 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 HEPHQ9BQS7 1158 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 GPR174Q9BXC1 333 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 BTBD1Q9H0C5 482 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 SP110Q9HB58 689 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 SHROOM3Q8TF72 1996 aa18.07■□□□□ 0.48
TNFSF13-204ENST00000396542 FAM186AA6NE01 2351 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 RALGAPA1Q6GYQ0 2036 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 SDK1Q7Z5N4 2213 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 BCLAF3A2AJT9 711 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 SLC7A4O43246 635 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 LRP3O75074 770 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 LEFTY1O75610 366 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 TNNT1P13805 278 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 TGM1P22735 817 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 CTNNA1P35221 906 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 CDKN2BP42772 138 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 DHPSP49366 369 aaPredicted RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 DNA2P51530 1060 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 NAP1L1P55209 391 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 ZNF33AQ06730 810 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 IFI16Q16666 785 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 ARSIQ5FYB1 569 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 PLA2G2CQ5R387 149 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 PEAR1Q5VY43 1037 aaPredicted RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 MFSD7Q6UXD7 560 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 DCLK2Q8N568 766 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 PLD5Q8N7P1 536 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 GRIN3AQ8TCU5 1115 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 KRT35Q92764 455 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 FOXJ1Q92949 421 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 OMDQ99983 421 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 PCDHA3Q9Y5H8 950 aa18.06■□□□□ 0.48
TNFSF13-204ENST00000396542 MACROD2A1Z1Q3 448 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 PALMO75781 387 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 POP4O95707 220 aaKnown RBP18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 SEMA4FO95754 770 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 IGSF6O95976 241 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 CTNNA2P26232 953 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 GARSP41250 739 aaKnown RBP18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 GBE1Q04446 702 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 CNTN1Q12860 1018 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 MYLK3Q32MK0 819 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ATXN7L2Q5T6C5 722 aaPredicted RBP18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 TMCO4Q5TGY1 634 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 AGBL4Q5VU57 503 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 LYSMD4Q5XG99 296 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ZNF662Q6ZS27 426 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ARMCX6Q7L4S7 300 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ATPAF2Q8N5M1 289 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 RNF10Q8N5U6 811 aaKnown RBP18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 DEFB119Q8N690 84 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 EXD1Q8NHP7 514 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 GANCQ8TET4 914 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ARRDC3Q96B67 414 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 HSPA12BQ96MM6 686 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 PSKH2Q96QS6 385 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 ARRDC1-AS1Q9H2J1 176 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 DTLQ9NZJ0 730 aa18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
TNFSF13-204ENST00000396542 METTL12A8MUP2 240 aa18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 KPNA3O00505 521 aaPredicted RBP18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 ITGB7P26010 798 aa18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 MPLP40238 635 aa18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 CSNK1DP48730 415 aa18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 ADPRHP54922 357 aa18.04■□□□□ 0.48
TNFSF13-204ENST00000396542 CREB5Q02930 508 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms