RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 DPF3Q92784 378 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 PSMG2Q969U7 264 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 HDAC11Q96DB2 347 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CEP295NLQ96MC4 621 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 RPRD1AQ96P16 312 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 LBHD1Q9BQE6 289 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 FERMT1Q9BQL6 677 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 C17orf80Q9BSJ5 609 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 RXFP1Q9HBX9 757 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 ZNF334Q9HCZ1 680 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 ENTPD7Q9NQZ7 604 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 ARHGEF3Q9NR81 526 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.08□□□□□ -1.281e-7■■□□□ 12.1
RTN4-205ENST00000394609 FNIP2Q9P278 1114 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CPSF2Q9P2I0 782 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 HSFX1Q9UBD0 423 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CHMP2BQ9UQN3 213 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 RAD54BQ9Y620 910 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CDH23Q9H251 3354 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CEP290O15078 2479 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CHD7Q9P2D1 2997 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 COL4A4P53420 1690 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 LTBP2Q14767 1821 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CARNS1A5YM72 827 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 RGS16O15492 202 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 MAFKO60675 156 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 KLKB1P03952 638 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 MAGEA6P43360 314 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 HARS2P49590 506 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 PAPOLAP51003 745 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 KPNA1P52294 538 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 MRPS35P82673 323 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 RING1Q06587 406 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 BNIP1Q12981 228 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SEMA5AQ13591 1074 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 E2F5Q15329 346 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 PARP6Q2NL67 630 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SNX30Q5VWJ9 437 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 PLPP4Q5VZY2 271 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 NUGGCQ68CJ6 796 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 FAM109BQ6ICB4 259 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 C4orf22Q6V702 233 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 TAOK1Q7L7X3 1001 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 OTOP3Q7RTS5 596 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 PALM2Q8IXS6 379 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 MPP5Q8N3R9 675 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 ATPAF2Q8N5M1 289 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 POF1BQ8WVV4 589 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 OVCA2Q8WZ82 227 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 WBP2Q969T9 261 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 STAMBPL1Q96FJ0 436 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 TRMT2BQ96GJ1 504 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 ZNF419Q96HQ0 510 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 KLHL5Q96PQ7 755 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 RAB3IPQ96QF0 476 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 SLC22A12Q96S37 553 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CDK5RAP1Q96SZ6 601 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 PRMT1Q99873 361 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 TRIM56Q9BRZ2 755 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 ROPN1BQ9BZX4 212 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 ZYG11BQ9C0D3 744 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 BRD8Q9H0E9 1235 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 NOL6Q9H6R4 1146 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 ROPN1Q9HAT0 212 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 TBK1Q9UHD2 729 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 HBS1LQ9Y450 684 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 TTLL3Q9Y4R7 772 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 LRRC42Q9Y546 428 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 MYO7AQ13402 2215 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 IGLV3-10A0A075B6K4 115 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 EXOC1LA0A1B0GW35 172 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 ARHGAP42A6NI28 874 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 E7ESA3 106 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 POC1B-GALNT4F8VUJ3 575 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 ACSL4O60488 711 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SNX3O60493 162 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 USP12O75317 370 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 STC2O76061 302 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SUN1O94901 812 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 C8AP07357 584 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CCNB1P14635 433 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 GJA1P17302 382 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 TACR2P21452 398 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 OR1E1P30953 314 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CORO1AP31146 461 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 SLC6A4P31645 630 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CD68P34810 354 aaPredicted RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 HTR7P34969 479 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 FDFT1P37268 417 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 SLC11A2P49281 568 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 CRADDP78560 199 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 COG7P83436 770 aa7.07□□□□□ -1.28
RTN4-205ENST00000394609 ROR2Q01974 943 aaKnown RBP7.07□□□□□ -1.28
RTN4-205ENST00000394609 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms