RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TBCCQ15814 346 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 UPP1Q16831 310 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 INSCQ1MX18 579 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 LSM12Q3MHD2 195 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ESRP1Q6NXG1 681 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 IPMKQ8NFU5 416 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ACTRT2Q8TDY3 377 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 KCTD13Q8WZ19 329 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 MCMBPQ9BTE3 642 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 GIT1Q9Y2X7 761 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 FIS1Q9Y3D6 152 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 C9IYK1 514 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 GRID2O43424 1007 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TRIM13O60858 407 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 BDNFP23560 247 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 CRABP2P29373 138 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 DPP6P42658 865 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 PDCD2Q16342 344 aaPredicted RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 IL31Q6EBC2 164 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 CENPLQ8N0S6 344 aaPredicted RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 FAM156AQ8NDB6 213 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 ISL2Q96A47 359 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 NAT9Q9BTE0 207 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 WDCPQ9H6R7 721 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 RUVBL2Q9Y230 463 aaKnown RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TTC24A2A3L6 582 aaPredicted RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 VAPBO95292 243 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 SLC35E2BP0CK96 405 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 LHX1P48742 406 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 NUDT2P50583 147 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 BTKQ06187 659 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TRIP10Q15642 601 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 ZC3HC1Q86WB0 502 aaKnown RBP13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 LSMEM2Q8N112 164 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 KLHDC9Q8NEP7 349 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 DPF3Q92784 378 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 RNF34Q969K3 372 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 NXNL1Q96CM4 212 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TEKT5Q96M29 485 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 GPAMQ9HCL2 828 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TNFRSF12AQ9NP84 129 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
GTF2F1-201ENST00000394456 MKI67P46013 3256 aaKnown RBP13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 CCL22O00626 93 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 CFLARO15519 480 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 ITGB1P05556 798 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 GLDCP23378 1020 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 ARNTP27540 789 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 PIK3R1P27986 724 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 GALNT2Q10471 571 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 ZNF789Q5FWF6 425 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 TSTD2Q5T7W7 516 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 FBXL19Q6PCT2 694 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 OXSMQ9NWU1 459 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 GRIA2P42262 883 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 THOP1P52888 689 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 POLE2P56282 527 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 NAB1Q13506 487 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 NXNQ6DKJ4 435 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 MRPL10Q7Z7H8 261 aaKnown RBP13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 PDSS2Q86YH6 399 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 TMEM86AQ8N2M4 240 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 FSTL5Q8N475 847 aaPredicted RBP13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 CCNYL1Q8N7R7 359 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 MYLPFQ96A32 169 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 RCN3Q96D15 328 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 FERMT1Q9BQL6 677 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 ZCWPW1Q9H0M4 648 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 SFMBT1Q9UHJ3 866 aa13.68□□□□□ -0.22
GTF2F1-201ENST00000394456 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 PMPCBO75439 489 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 ETS2P15036 469 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 XRCC1P18887 633 aaPredicted RBP13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 FBXW8Q8N3Y1 598 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 HDAC11Q96DB2 347 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 CMTM5Q96DZ9 223 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 XPR1Q9UBH6 696 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 THSD7BQ9C0I4 1608 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 MYOCOSA0A1B0GUC4 107 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 MATN2O00339 956 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 DLX3O60479 287 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 HDCP19113 662 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 MS4A2Q01362 244 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 SCAPQ12770 1279 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms