RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 LSMEM2Q8N112 164 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 NUP93Q8N1F7 819 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 DCBLD1Q8N8Z6 715 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 NDRG1Q92597 394 aaKnown RBP11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 PRCCQ92733 491 aaPredicted RBP11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 KRT35Q92764 455 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 SIPA1Q96FS4 1042 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 FBXO44Q9H4M3 255 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 POPDC2Q9HBU9 364 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 COMMD8Q9NX08 183 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 DDX56Q9NY93 547 aaKnown RBP11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 RRN3Q9NYV6 651 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 USP3Q9Y6I4 520 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 STON1Q9Y6Q2 735 aa11.36□□□□□ -0.59
VTI1BP2-201ENST00000394154 FLNCQ14315 2725 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 WASH3PC4AMC7 463 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 K7ENP7 123 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 NPC1O15118 1278 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 LTFP02788 710 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ITGAVP06756 1048 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 SLC5A3P53794 718 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 TAS2R40P59535 323 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ERVPABLB-1P60509 514 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 USP46P62068 366 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 DCAF6Q58WW2 860 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 KIAA1614Q5VZ46 1190 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 INO80CQ6PI98 192 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 LAYNQ6UX15 382 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 POLNQ7Z5Q5 900 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 GATAD2AQ86YP4 633 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 TMPRSS6Q8IU80 811 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 BBS7Q8IWZ6 715 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 KATNAL2Q8IYT4 538 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 RCOR2Q8IZ40 523 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 RASGEF1CQ8N431 466 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 SCAMP5Q8TAC9 235 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ACTRT1Q8TDG2 376 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ALG3Q92685 438 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 CFAP57Q96MR6 1250 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 SLC2A13Q96QE2 648 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 STAP1Q9ULZ2 295 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 SCML2Q9UQR0 700 aa11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP2-201ENST00000394154 YJEFN3A6XGL0 299 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 E7ENQ6 273 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 YKT6O15498 198 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 SUV39H1O43463 412 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 LRCH4O75427 683 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 CR2P20023 1033 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 YWHAQP27348 245 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 MIPP30301 263 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 GJC1P36383 396 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 CCR10P46092 362 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 TERF1P54274 439 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 C21orf59P57076 290 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 ATP11AP98196 1134 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 INSM1Q01101 510 aaPredicted RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 CDO1Q16878 200 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 C15orf59Q2T9L4 293 aaPredicted RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 SLC25A52Q3SY17 297 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 BOLA3Q53S33 107 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 KCNT1Q5JUK3 1230 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 BSPRYQ5W0U4 402 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 TRNP1Q6NT89 227 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 SCYL2Q6P3W7 929 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 XKR5Q6UX68 686 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 BEND5Q7L4P6 421 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 STRADAQ7RTN6 431 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 EXD1Q8NHP7 514 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 FAM172AQ8WUF8 416 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 MAIP1Q8WWC4 291 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 CENPIQ92674 756 aaPredicted RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 RBM41Q96IZ5 413 aaKnown RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 MS4A14Q96JA4 679 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 SLITRK1Q96PX8 696 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 ELF4Q99607 663 aaPredicted RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 C6orf106Q9H6K1 298 aaPredicted RBP11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 STARD5Q9NSY2 213 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 TMEM51Q9NW97 253 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 IL37Q9NZH6 218 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 NOTCH2Q04721 2471 aa11.34□□□□□ -0.59
VTI1BP2-201ENST00000394154 EFCAB8A8MWE9 144 aa11.33□□□□□ -0.6
VTI1BP2-201ENST00000394154 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
VTI1BP2-201ENST00000394154 PDE2AO00408 941 aaPredicted RBP11.33□□□□□ -0.6
VTI1BP2-201ENST00000394154 SYNCRIPO60506 623 aaKnown RBP11.33□□□□□ -0.6
VTI1BP2-201ENST00000394154 KRT38O76015 456 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms