RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ATXN3LQ9H3M9 355 aa14.15□□□□□ -0.14
GAPVD1-205ENST00000394084 SUDS3Q9H7L9 328 aaPredicted RBP14.15□□□□□ -0.14
GAPVD1-205ENST00000394084 WDR41Q9HAD4 459 aa14.15□□□□□ -0.14
GAPVD1-205ENST00000394084 TRHDEQ9UKU6 1024 aa14.15□□□□□ -0.14
GAPVD1-205ENST00000394084 NEMP2A6NFY4 417 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PTGESO14684 152 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 CABYRO75952 493 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PGK1P00558 417 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SNAPC2Q13487 334 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 GK3PQ14409 553 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PRPSAP1Q14558 356 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 NAPEPLDQ6IQ20 393 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 ESRP1Q6NXG1 681 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SENP8Q96LD8 212 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 CNBD2Q96M20 576 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SLC9A7Q96T83 725 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 UBAP1Q9NZ09 502 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 CLIC5Q9NZA1 410 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SLC2A6Q9UGQ3 507 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PRPF19Q9UMS4 504 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 APOA4P06727 396 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 AFF1P51825 1210 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SLC12A1Q13621 1099 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 R3HDM1Q15032 1099 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 MFSD6LQ8IWD5 586 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PNPLA1Q8N8W4 532 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 STYXQ8WUJ0 223 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 APPL1Q9UKG1 709 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 ACOT9Q9Y305 439 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PDHXO00330 501 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 HNRNPLP14866 589 aaKnown RBP eCLIP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SCAPQ12770 1279 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 GRM2Q14416 872 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PIGGQ5H8A4 983 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 PTAR1Q7Z6K3 402 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 LILRA2Q8N149 483 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 CCDC28BQ9BUN5 200 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 FICDQ9BVA6 458 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 C6orf203Q9P0P8 240 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 ANKRD6Q9Y2G4 727 aa14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 COPG1Q9Y678 874 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-205ENST00000394084 SMIM35A0A1B0GVV1 85 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 FAM95CA0A1B0GW59 222 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 MTSS1O43312 755 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 PEX1O43933 1283 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 DNAJA2O60884 412 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 SH2D4BQ5SQS7 431 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 GK5Q6ZS86 529 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 RPS27LQ71UM5 84 aaKnown RBP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 SPATA24Q86W54 205 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 RNF135Q8IUD6 432 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 SNX31Q8N9S9 440 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 ZSCAN18Q8TBC5 510 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 NAT14Q8WUY8 206 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 ELMO2Q96JJ3 720 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 BTBD9Q96Q07 612 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 DMAP1Q9NPF5 467 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 CRTAMO95727 393 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 RARS2Q5T160 578 aaKnown RBP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 PCDH20Q8N6Y1 951 aaKnown RBP14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 PKP2Q99959 881 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 TINF2Q9BSI4 451 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 ADA2Q9NZK5 511 aa14.13□□□□□ -0.15
GAPVD1-205ENST00000394084 PMPCBO75439 489 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 SPATA31D3P0C874 917 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 PABPC4LP0CB38 370 aaKnown RBP14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 ATP6V1B1P15313 513 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 ME2P23368 584 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 SEPT6Q14141 434 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 FRG1Q14331 258 aaKnown RBP14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 XKR4Q5GH76 650 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 TSTD2Q5T7W7 516 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 IYDQ6PHW0 289 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 SPATA31D4Q6ZUB0 917 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 RDH11Q8TC12 318 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 ZNF419Q96HQ0 510 aaPredicted RBP14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 TBL1YQ9BQ87 522 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 KIFC1Q9BW19 673 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 ZNF408Q9H9D4 720 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 TBC1D30Q9Y2I9 924 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 RAD54BQ9Y620 910 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 AP4B1Q9Y6B7 739 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 TRIP12Q14669 1992 aaPredicted RBP14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 GABRDO14764 452 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 SMIM18P0DKX4 95 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 STMN1P16949 149 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 HCAR3P49019 387 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 RAB10P61026 200 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 C6orf52Q5T4I8 152 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 PKN3Q6P5Z2 889 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
GAPVD1-205ENST00000394084 PGAM4Q8N0Y7 254 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms