RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CD83Q01151 205 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HADHQ16836 314 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 RAP1GAP2Q684P5 730 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CTRB2Q6GPI1 263 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 SLC51AQ86UW1 340 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TBC1D21Q8IYX1 336 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 BANPQ8N9N5 519 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 LNX1Q8TBB1 728 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TBCBQ99426 244 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PSD2Q9BQI7 771 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 IER2Q9BTL4 223 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ILKAPQ9H0C8 392 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ACSS3Q9H6R3 686 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 IL1RL2Q9HB29 575 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CATSPERZQ9NTU4 200 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 MAFFQ9ULX9 164 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 SPATA2Q9UM82 520 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PLCL2Q9UPR0 1127 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 F5H6K3 240 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HTRA2O43464 458 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TYROBPO43914 113 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 P4HBP07237 508 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ZSCAN5DPP0CG00 497 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 GLULP15104 373 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 STAT3P40763 770 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 MERTKQ12866 999 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TRAP1Q12931 704 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 KCNT1Q5JUK3 1230 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 COLEC12Q5KU26 742 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 AMIGO3Q86WK7 504 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 FAM178BQ8IXR5 827 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 C8orf59Q8N0T1 100 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 FAM71DQ8N9W8 422 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ACDQ96AP0 544 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 C17orf62Q9BQA9 187 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TARS2Q9BW92 718 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM245Q9H330 911 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 WASH6PQ9NQA3 447 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HPS4Q9NQG7 708 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 MTMR4Q9NYA4 1195 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TAS2R14Q9NYV8 317 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 GTSE1Q9NYZ3 720 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 IFT80Q9P2H3 777 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HSPB11Q9Y547 144 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PNMA6FA0A0J9YX94 578 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 AGRPO00253 132 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 FSCN2O14926 492 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 LYPLA1O75608 230 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 S100A6P06703 90 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 MATN1P21941 496 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 FMO5P49326 533 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 GPX6P59796 221 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 FASTKD3Q14CZ7 662 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 NPTX1Q15818 432 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 IMPG1Q17R60 797 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 TRIM71Q2Q1W2 868 aaKnown RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 STRIP1Q5VSL9 837 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 BTBD8Q5XKL5 378 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PM20D2Q8IYS1 436 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CACTIN-AS1Q8N1I8 211 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 SLAIN1Q8ND83 568 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PSD4Q8NDX1 1056 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 EPS8L1Q8TE68 723 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ASZ1Q8WWH4 475 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HERVK_113Q902F9 699 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 LENG8Q96PV6 779 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 SLC6A15Q9H2J7 730 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 KCNQ5Q9NR82 932 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CD274Q9NZQ7 290 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 BANF1O75531 89 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RNASEH2AO75792 299 aaKnown RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 NTRK1P04629 796 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RFX1P22670 979 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 HNF1BP35680 557 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RAP1GAPP47736 663 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SLC26A2P50443 739 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 AP3B2Q13367 1082 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SLC12A1Q13621 1099 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 EFR3AQ14156 821 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SCML4Q8N228 414 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 FAM156AQ8NDB6 213 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 GLIS3Q8NEA6 775 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RP9Q8TA86 221 aaKnown RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 TXNDC15Q96J42 360 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 HSFY1Q96LI6 401 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 NT5C1BQ96P26 610 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SH3GLB2Q9NR46 395 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 BARHL2Q9NY43 387 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 KIAA1522Q9P206 1035 aaPredicted RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 KLQ9UEF7 1012 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 OGDHLQ9ULD0 1010 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 EDARQ9UNE0 448 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 HCN4Q9Y3Q4 1203 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 MEIS1O00470 390 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms