RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 FAM43BQ6ZT52 329 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 SDCCAG8Q86SQ7 713 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 SPATA2LQ8IUW3 424 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 ICA1LQ8NDH6 482 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 LRRC39Q96DD0 335 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 CASD1Q96PB1 797 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PREBQ9HCU5 417 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 RCOR3Q9P2K3 495 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 FBXW11Q9UKB1 542 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PCDHA11Q9Y5I1 949 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PATJQ8NI35 1801 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 TPP1O14773 563 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PLIN3O60664 434 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 ASLP04424 464 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 COL6A1P12109 1028 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PGFP49763 221 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 PDE1CQ14123 709 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 TIFABQ6ZNK6 161 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 KBTBD6Q86V97 674 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 C10orf107Q8IVU9 208 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 FBXW8Q8N3Y1 598 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 IRGQQ8WZA9 623 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 SCLYQ96I15 445 aa18.66■□□□□ 0.58
TRAF3-203ENST00000392745 STN1Q9H668 368 aaKnown RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 ELAC1Q9H777 363 aaKnown RBP18.66■□□□□ 0.58
TRAF3-203ENST00000392745 F5H423 210 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 ZNF195O14628 629 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 TNFRSF10BO14763 440 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 TADA2AO75478 443 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 CD1EP15812 388 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 GRIK1P39086 918 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 ATN1P54259 1190 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 IFRD2Q12894 506 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 USP4Q13107 963 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 MCUQ8NE86 351 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 PRICKLE1Q96MT3 831 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 COLEC11Q9BWP8 271 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 UBAP1Q9NZ09 502 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 DTNAQ9Y4J8 743 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 PITPNM1O00562 1244 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 VILLO15195 856 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 DCXO43602 365 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 MFSD11O43934 449 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 DGKIO75912 1065 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 PRKCGP05129 697 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 FDFT1P37268 417 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 CRADDP78560 199 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 RBM44Q6ZP01 1051 aaKnown RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 ABI1Q8IZP0 508 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 CRIPAKQ8N1N5 446 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 SCML4Q8N228 414 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 NTAN1Q96AB6 310 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 CMTM5Q96DZ9 223 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 SEZ6LQ9BYH1 1024 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 RNF208Q9H0X6 261 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 MOCS1Q9NZB8 636 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 NUP205Q92621 2012 aa18.65■□□□□ 0.58
TRAF3-203ENST00000392745 COL4A4P53420 1690 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-203ENST00000392745 E2F8A0AVK6 867 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 AP1G1O43747 822 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 PENKP01210 267 aaPredicted RBP18.64■□□□□ 0.58
TRAF3-203ENST00000392745 SERPINE1P05121 402 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 TFAP2AP05549 437 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 ALDH1A3P47895 512 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 USP46P62068 366 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 DPYSQ14117 519 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 MAP7Q14244 749 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 OGFRL1Q5TC84 451 aaPredicted RBP18.64■□□□□ 0.58
TRAF3-203ENST00000392745 TP53INP2Q8IXH6 220 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 DGCR14Q96DF8 476 aaKnown RBP18.64■□□□□ 0.58
TRAF3-203ENST00000392745 B3GALT6Q96L58 329 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 BTBD9Q96Q07 612 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 LGMNQ99538 433 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 EPB41L1Q9H4G0 881 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 MAN1C1Q9NR34 630 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 DNAJC28Q9NX36 388 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 HSFX1Q9UBD0 423 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.58
TRAF3-203ENST00000392745 ZBTB14O43829 449 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 ATP9BO43861 1147 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 SLC5A3P53794 718 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 SCAPQ12770 1279 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 SEMA3BQ13214 749 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 PPM1JQ5JR12 505 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 VARS2Q5ST30 1063 aaKnown RBP18.64■□□□□ 0.57
TRAF3-203ENST00000392745 TAC4Q86UU9 113 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 CDKL3Q8IVW4 592 aaPredicted RBP18.64■□□□□ 0.57
TRAF3-203ENST00000392745 PPP4R1Q8TF05 950 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 SEPT8Q92599 483 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 DCUN1D1Q96GG9 259 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 ABI2Q9NYB9 513 aaPredicted RBP18.64■□□□□ 0.57
TRAF3-203ENST00000392745 TMCO1Q9UM00 188 aa18.64■□□□□ 0.57
TRAF3-203ENST00000392745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.63■□□□□ 0.57
TRAF3-203ENST00000392745 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
TRAF3-203ENST00000392745 EEF2KO00418 725 aaKnown RBP18.63■□□□□ 0.57
TRAF3-203ENST00000392745 HNRNPRO43390 633 aaKnown RBP18.63■□□□□ 0.57
TRAF3-203ENST00000392745 ITGA2BP08514 1039 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms