RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CHD9Q3L8U1 2897 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 WDR27A2RRH5 827 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 ZBBXA8MT70 800 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 BUD23O43709 281 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 STX2P32856 288 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 OR1D2P34982 312 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 NRLP54845 237 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 MPP2Q14168 576 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 BORAQ6PGQ7 559 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 OR6Y1Q8NGX8 325 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 SLCO2A1Q92959 643 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 IL23AQ9NPF7 189 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 DDIT4Q9NX09 232 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 FZD10Q9ULW2 581 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 STAP1Q9ULZ2 295 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 MFHAS1Q9Y4C4 1052 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 SOBPA7XYQ1 873 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 EIF2S1P05198 315 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 OCM2P0CE71 109 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 OCMP0CE72 109 aaPredicted RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 CHRNB1P11230 501 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 C16orf72Q14CZ0 275 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 OASLQ15646 514 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 DPYSL2Q16555 572 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 USP41Q3LFD5 358 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 ELMSAN1Q6PJG2 1045 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 DCDC5Q6ZRR9 648 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 NLRP9Q7RTR0 991 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 CCDC33Q8N5R6 958 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 PLD5Q8N7P1 536 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 AUTS2Q8WXX7 1259 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 SEPT5Q99719 369 aaPredicted RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 GPATCH1Q9BRR8 931 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 KLHL4Q9C0H6 718 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 ARMC7Q9H6L4 198 aa19.29■□□□□ 0.68
CCDC50-202ENST00000392456 TRNAU1APQ9NX07 287 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 ZMAT5Q9UDW3 170 aaKnown RBP19.29■□□□□ 0.68
CCDC50-202ENST00000392456 FAM72CH0Y354 149 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 CLPTM1O96005 669 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 TFPTP0C1Z6 253 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 IVDP26440 423 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 FOXN2P32314 431 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 GSSP48637 474 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 ENTPD1P49961 510 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 PHKG1Q16816 387 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 MGAT5BQ3V5L5 792 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 FAM72AQ5TYM5 149 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SIGIRRQ6IA17 410 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 FAM72DQ6L9T8 149 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 TAC4Q86UU9 113 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 FAM72BQ86X60 149 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SLC39A11Q8N1S5 342 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 NETO2Q8NC67 525 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SLC35B2Q8TB61 432 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 EME1Q96AY2 570 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 CLSTN3Q9BQT9 956 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 NDE1Q9NXR1 346 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 PTPRSQ13332 1948 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 A0A1W2PQH9 124 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 GOT1P17174 413 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SYN1P17600 705 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 AMPD1P23109 780 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SERPINB6P35237 376 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 RCVRNP35243 200 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 GDF10P55107 478 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC50-202ENST00000392456 ROR1Q01973 937 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 PDK2Q15119 407 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 ERI1Q8IV48 349 aaKnown RBP19.28■□□□□ 0.68
CCDC50-202ENST00000392456 PPP4R1Q8TF05 950 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 C8orf48Q96LL4 319 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 YME1L1Q96TA2 773 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 C2orf49Q9BVC5 232 aaPredicted RBP19.28■□□□□ 0.68
CCDC50-202ENST00000392456 SNX10Q9Y5X0 201 aa19.28■□□□□ 0.68
CCDC50-202ENST00000392456 CFAP69A5D8W1 941 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 KMOO15229 486 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 GAS8O95995 478 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 CDH3P22223 829 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 PPARGP37231 505 aaPredicted RBP19.27■□□□□ 0.68
CCDC50-202ENST00000392456 VCPP55072 806 aaKnown RBP19.27■□□□□ 0.68
CCDC50-202ENST00000392456 PDK3Q15120 406 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 PSMD5Q16401 504 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 CRY1Q16526 586 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 ZNF558Q96NG5 402 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 KCNK9Q9NPC2 374 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 GIN1Q9NXP7 522 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 MTRRQ9UBK8 725 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 SFMBT1Q9UHJ3 866 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 SLC30A1Q9Y6M5 507 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 ALPK3Q96L96 1907 aa19.27■□□□□ 0.68
CCDC50-202ENST00000392456 SEPT6Q14141 434 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 SUZ12Q15022 739 aaKnown RBP19.27■□□□□ 0.67
CCDC50-202ENST00000392456 KIAA1841Q6NSI8 718 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 RASSF3Q86WH2 238 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 SCML4Q8N228 414 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 COLGALT1Q8NBJ5 622 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 GABPB2Q8TAK5 448 aaPredicted RBP19.27■□□□□ 0.67
CCDC50-202ENST00000392456 GIPC2Q8TF65 315 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 C10orf82Q8WW14 230 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms