RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 TROAPQ12815 778 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 IFIT5Q13325 482 aaKnown RBP3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 FAM69BQ5VUD6 431 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 TYW3Q6IPR3 259 aaKnown RBP3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 DGLUCYQ7Z3D6 616 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 DPP9Q86TI2 863 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 SLC2A12Q8TD20 617 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 ZNF385AQ96PM9 386 aaKnown RBP3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 EBF2Q9HAK2 575 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 PCDHA10Q9Y5I2 948 aa3.1□□□□□ -1.91
RNU6-1009P-201ENST00000390996 COL2A1P02458 1487 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 IGHV4OR15-8A0A075B7B6 117 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 FAM172BPA6NC97 362 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 P2RY10O00398 339 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 PIP5K1BO14986 540 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 EDIL3O43854 480 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 PMS2P2O95744 297 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 CH25HO95992 272 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 IGHV4-30-4P0DP06 118 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 RFC1P35251 1148 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 KRT2P35908 639 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 CDK7P50613 346 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 ST3GAL1Q11201 340 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 UNQ6126/PRO20091Q6UXV3 157 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 SCN4BQ8IWT1 228 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 VPS52Q8N1B4 723 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 ZNF485Q8NCK3 441 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 HMGB4Q8WW32 186 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 DUX3Q96PT4 197 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 NAA15Q9BXJ9 866 aaKnown RBP3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 NPFFR1Q9GZQ6 430 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 PDE11AQ9HCR9 933 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 LIN7CQ9NUP9 197 aaKnown RBP3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 SLC25A13Q9UJS0 675 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 PCDHAC2Q9Y5I4 1007 aa3.09□□□□□ -1.91
RNU6-1009P-201ENST00000390996 C17orf100A8MU93 164 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 AMBPP02760 352 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CKMT1AP12532 417 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ATF3P18847 181 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 GSTM2P28161 218 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 SSTR2P30874 369 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 DPP6P42658 865 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ERVK11-1P61568 191 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PHEXP78562 749 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 BTBD16Q32M84 506 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 GXYLT1Q4G148 440 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 GDPD4Q6W3E5 623 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CIARTQ8N365 385 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 RSC1A1Q92681 617 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PRPF18Q99633 342 aaKnown RBP3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 IFT27Q9BW83 186 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 STK33Q9BYT3 514 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TRIM31Q9BZY9 425 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 UPB1Q9UBR1 384 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 SLC39A10Q9ULF5 831 aa3.08□□□□□ -1.92
RNU6-1009P-201ENST00000390996 J3KR12 359 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ASNA1O43681 348 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CRYAAP02489 173 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ZNF883P0CG24 379 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 LYL1P12980 280 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 HOXC13P31276 330 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TIMP3P35625 211 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TM4SF4P48230 202 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ZNF132P52740 706 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 BRWD1-AS2P59051 145 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CYP4A11Q02928 519 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ALKBH1Q13686 389 aaKnown RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TBRG1Q3YBR2 411 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PLEKHO1Q53GL0 409 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 IZUMO3Q5VZ72 239 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TRMT1LQ7Z2T5 733 aaKnown RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TMC8Q8IU68 726 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 AADATQ8N5Z0 425 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 MAB21L3Q8N8X9 362 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ZNF441Q8N8Z8 693 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 KBTBD3Q8NAB2 608 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 OR1N1Q8NGS0 311 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 LRRC8CQ8TDW0 803 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 USP13Q92995 863 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 FBXO17Q96EF6 278 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 FEM1CQ96JP0 617 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 RIPOR3Q96MK2 946 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TEFMQ96QE5 360 aaKnown RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CADM1Q9BY67 442 aaKnown RBP3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 ZNF696Q9H7X3 374 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 TMEM51Q9NW97 253 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 LRFN1Q9P244 771 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PHTF1Q9UMS5 762 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 FAM50BQ9Y247 325 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 RCE1Q9Y256 329 aa3.07□□□□□ -1.92
RNU6-1009P-201ENST00000390996 RASA4BC9J798 803 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 CHL1O00533 1208 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 APAF1O14727 1248 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PMM2O15305 246 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 RASA4O43374 803 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 PCP4P48539 62 aa3.06□□□□□ -1.92
RNU6-1009P-201ENST00000390996 FAM27E3Q08E93 113 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms