RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 PAFAH1B3Q15102 231 aaKnown RBP16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 CST6Q15828 149 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 POM121L1PQ3SYA9 428 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 INO80DQ53TQ3 878 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 CARD16Q5EG05 197 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 METTL3Q86U44 580 aaKnown RBP16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 OR2A12Q8NGT7 310 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 CASKIN2Q8WXE0 1202 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 HEY1Q9Y5J3 304 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 CAPN6Q9Y6Q1 641 aa16.43■□□□□ 0.22
IGHV3-23-201ENST00000390609 CCDC66A2RUB6 948 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 C1QTNF3-AMACRE9PGA6 284 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 MID1O15344 667 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 NDUFS2O75306 463 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 KRT10P13645 584 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 BCKDHBP21953 392 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CTNNA2P26232 953 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CHRNA3P32297 505 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 SLC8A1P32418 973 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CDKN2BP42772 138 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 RWDD2BP57060 319 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 GBE1Q04446 702 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 ZBTB16Q05516 673 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 IL10RBQ08334 325 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 TFDP2Q14188 446 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CYTH1Q15438 398 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 PPM1JQ5JR12 505 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 ATXN7L2Q5T6C5 722 aaPredicted RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 FAM46CQ5VWP2 391 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 DPY19L3Q6ZPD9 716 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 NT5DC3Q86UY8 548 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 KBTBD6Q86V97 674 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 DEFB119Q8N690 84 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 CHST14Q8NCH0 376 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 OR6K2Q8NGY2 324 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 EXD1Q8NHP7 514 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 GRIN3AQ8TCU5 1115 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 NSMCE1Q8WV22 266 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 ISG20Q96AZ6 181 aaKnown RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 EXOC2Q96KP1 924 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 OMDQ99983 421 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 PABPC3Q9H361 631 aaKnown RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 KCNF1Q9H3M0 494 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 ZDHHC6Q9H6R6 413 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 PDFQ9HBH1 243 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 IL36AQ9UHA7 158 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 PACSIN2Q9UNF0 486 aaPredicted RBP16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 NCKAP1Q9Y2A7 1128 aa16.42■□□□□ 0.22
IGHV3-23-201ENST00000390609 IGHV1OR15-9A0A0B4J2B8 117 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 KPNA3O00505 521 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 KRIT1O00522 736 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ALOX15BO15296 676 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ZNF821O75541 412 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 RNASEH2AO75792 299 aaKnown RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 IGSF6O95976 241 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ADH1BP00325 375 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 CCDC173Q0VFZ6 552 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ELF2Q15723 593 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ARSIQ5FYB1 569 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 C11orf74Q86VG3 221 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 VSIG1Q86XK7 387 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 UBL4BQ8N7F7 174 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 OR2AP1Q8NGE2 309 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 PIP4K2CQ8TBX8 421 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 NETO1Q8TDF5 533 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 GDAP1L1Q96MZ0 367 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 ALS2CR12Q96Q35 445 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 HEPHQ9BQS7 1158 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 FBXL12Q9NXK8 326 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 USP36Q9P275 1121 aaKnown RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 MBD1Q9UIS9 605 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 SCML1Q9UN30 329 aa16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.41■□□□□ 0.22
IGHV3-23-201ENST00000390609 CKAP5Q14008 2032 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 A0A1W2PP55 124 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 SLC30A4O14863 429 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 CST8O60676 142 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 RHOBTB1O94844 696 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 GSRP00390 522 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 PRNPP04156 253 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 MX2P20592 715 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 C5AR1P21730 350 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 CD6P30203 668 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 OXTRP30559 389 aa16.4■□□□□ 0.22
IGHV3-23-201ENST00000390609 GKP32189 559 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms