RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 C2CD6Q53TS8 623 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 TBC1D9BQ66K14 1250 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 H1FOOQ8IZA3 346 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 SCML4Q8N228 414 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 LRRC57Q8N9N7 239 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 PRSS33Q8NF86 280 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 CEP76Q8TAP6 659 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 ZNF799Q96GE5 643 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 TMEM19Q96HH6 336 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 ST6GAL2Q96JF0 529 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 C1orf147Q96MC9 270 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 ASB8Q9H765 288 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 PDFQ9HBH1 243 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 ZNF304Q9HCX3 659 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 CYTL1Q9NRR1 136 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 HDAC6Q9UBN7 1215 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 ABCF2Q9UG63 623 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 FEZ2Q9UHY8 353 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 TUBE1Q9UJT0 475 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 VSIG4Q9Y279 399 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 SLC27A6Q9Y2P4 619 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 PCDHA3Q9Y5H8 950 aa-0.28□□□□□ -2.45
TRAJ53-201ENST00000390485 TAF1P21675 1872 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ZNF469Q96JG9 3925 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MYO10Q9HD67 2058 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 IGHV3OR16-10A0A075B7F0 116 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 A0A0G2JLW4 131 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MYO1CO00159 1063 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC33A1O00400 549 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 DVL1O14640 695 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PPP1R12AO14974 1030 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 EPHB6O15197 1021 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MID1O15344 667 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MSI1O43347 362 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 STRNO43815 780 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 NDUFS2O75306 463 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 LY6G6DO95868 133 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MELTFP08582 738 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ARL14EPLP0DKL9 152 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ACADMP11310 421 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FOLR2P14207 255 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 TYRP14679 529 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 BCL3P20749 454 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ACVR2AP27037 513 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PIK3R1P27986 724 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC8A1P32418 973 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 HTR7P34969 479 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SOX5P35711 763 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MAP2K2P36507 400 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 RPL3P39023 403 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 HOXA1P49639 335 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 DGKQP52824 942 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC16A1P53985 500 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 DVL1P1P54792 670 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 TMPRSS3P57727 454 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SNX16P57768 344 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 RELQ04864 619 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SPOCK1Q08629 439 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 GALNT3Q14435 633 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 SF3A1Q15459 793 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 OASLQ15646 514 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ZNF79Q15937 498 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 KRTAP6-3Q3LI67 103 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FASTKD1Q53R41 847 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 C10orf76Q5T2E6 689 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 MAP3K21Q5TCX8 1036 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FAM122CQ6P4D5 195 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 BHLHB9Q6PI77 547 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FBXO46Q6PJ61 603 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 CCBE1Q6UXH8 406 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 HEATR3Q7Z4Q2 680 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 OAFQ86UD1 273 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 IGFN1Q86VF2 1251 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 P3H2Q8IVL5 708 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 HERC6Q8IVU3 1022 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 CKAP2LQ8IYA6 745 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PPM1KQ8N3J5 372 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 HORMAD2Q8N7B1 307 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 CMASQ8NFW8 434 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 STT3BQ8TCJ2 826 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FCAMRQ8WWV6 532 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FAM104AQ969W3 186 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ZNF354BQ96LW1 612 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 GPR78Q96P69 363 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 DEPDC7Q96QD5 511 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 TEX13BQ9BXU2 312 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 YTHDF1Q9BYJ9 559 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PUS3Q9BZE2 481 aaKnown RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PLEKHA5Q9HAU0 1116 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 NTN4Q9HB63 628 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 VTA1Q9NP79 307 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 RXFP3Q9NSD7 469 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ZSCAN32Q9NX65 697 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 FAF1Q9UNN5 650 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 PCDHA1Q9Y5I3 950 aa-0.29□□□□□ -2.46
TRAJ53-201ENST00000390485 ARHGAP10A1A4S6 786 aa-0.3□□□□□ -2.46
TRAJ53-201ENST00000390485 LRCOL1A6NCL2 159 aa-0.3□□□□□ -2.46
TRAJ53-201ENST00000390485 KCNJ18B7U540 433 aa-0.3□□□□□ -2.46
TRAJ53-201ENST00000390485 TIMM23O14925 209 aa-0.3□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC16A6O15403 523 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms