RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MTERF2Q49AM1 385 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 GLE1Q53GS7 698 aaKnown RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 TFDP3Q5H9I0 405 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 PDSS1Q5T2R2 415 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 ADAMTSL4-AS1Q5T5F5 129 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 MAP3K21Q5TCX8 1036 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 BHLHB9Q6PI77 547 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF474Q6S9Z5 364 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 SLC35F5Q8WV83 523 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 BCANQ96GW7 911 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 CLPTM1LQ96KA5 538 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 GPR101Q96P66 508 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 MESP1Q9BRJ9 268 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 MKKSQ9NPJ1 570 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 CNNM1Q9NRU3 951 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 VPS45Q9NRW7 570 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 BRWD1Q9NSI6 2320 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 RNF146Q9NTX7 359 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 SPTLC3Q9NUV7 552 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 ATAD3AQ9NVI7 634 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 TRMT1Q9NXH9 659 aaKnown RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 TMEM181Q9P2C4 612 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 IL17BQ9UHF5 180 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 VPS4AQ9UN37 437 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 SLC45A1Q9Y2W3 748 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 PCDHA13Q9Y5I0 950 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 RAI2Q9Y5P3 530 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 CHD6Q8TD26 2715 aa-0.51□□□□□ -2.49
RNU6-540P-201ENST00000384622 FN1P02751 2386 aaKnown RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 COL22A1Q8NFW1 1626 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 A0A1B0GVM2 712 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CCDC85CA6NKD9 419 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF587BE7ETH6 402 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 GPRIN2O60269 458 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CIDEAO60543 219 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 TIPRLO75663 272 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CH25HO95992 272 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 LINC00271P0C7V0 271 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 ARP10275 920 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CDH1P12830 882 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 IL4RP24394 825 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 SLC16A2P36021 539 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 DCTP40126 519 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 VIPR2P41587 438 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CPT1AP50416 773 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 GAB1Q13480 694 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 C3AR1Q16581 482 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 PTCHD3Q3KNS1 767 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 AMZ1Q400G9 498 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 TMEM71Q6P5X7 295 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 TFAP2EQ6VUC0 442 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF852Q6ZMS4 543 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 MIGA2Q7L4E1 593 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 C14orf80Q86SX3 495 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 PLD3Q8IV08 490 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 HERC6Q8IVU3 1022 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 SPARTQ8N0X7 666 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 CPA6Q8N4T0 437 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 PPM1NQ8N819 430 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 ENAHQ8N8S7 591 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 TNPO1Q92973 898 aaKnown RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 STARD4Q96DR4 205 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 SGF29Q96ES7 293 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 STAMBPL1Q96FJ0 436 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 REXO5Q96IC2 774 aaKnown RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 GMPPAQ96IJ6 420 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 MRGPRX4Q96LA9 322 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 FEZ1Q99689 392 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 SYT15Q9BQS2 421 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 C1orf43Q9BWL3 253 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 BACH2Q9BYV9 841 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 KLHL31Q9H511 634 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 FBXO40Q9UH90 709 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 SIX4Q9UIU6 781 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 TUBD1Q9UJT1 453 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 KCNS2Q9ULS6 477 aa-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 FLNBO75369 2602 aaKnown RBP-0.52□□□□□ -2.49
RNU6-540P-201ENST00000384622 NF1P21359 2839 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNFX1Q9P2E3 1918 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 NPIPB5A8MRT5 1133 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 NPIPB4C9JG80 1138 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 NEURL1O76050 574 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 WISP3O95389 354 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 TNFRSF6BO95407 300 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 VDRP11473 427 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 MYF5P13349 255 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 PDIA4P13667 645 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 MALP21145 153 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 SMARCA1P28370 1054 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 AGFG1P52594 562 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 RPP30P78346 268 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 DMWDQ09019 674 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 EBI3Q14213 229 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 MYBPC2Q14324 1141 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 SART3Q15020 963 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 WDR38Q5JTN6 314 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 CELF3Q5SZQ8 465 aaKnown RBP-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 HEPHL1Q6MZM0 1159 aa-0.53□□□□□ -2.49
RNU6-540P-201ENST00000384622 SLC4A10Q6U841 1118 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms