RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 PLCL1Q15111 1095 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 LCN1P1Q5VSP4 162 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 C16orf46Q6P387 395 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 RXFP2Q8WXD0 754 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 RCN3Q96D15 328 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 CCDC115Q96NT0 180 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 DDX3YO15523 660 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 ERVK-10P10266 1014 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 ITGALP20701 1170 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 MAGP20916 626 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 SLC5A3P53794 718 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 BNIP1Q12981 228 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 USP21Q9UK80 565 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 WWP2O00308 870 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 TADA2AO75478 443 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 BMP10O95393 424 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 JCHAINP01591 159 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 VBP1P61758 197 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 LDLRAP1Q5SW96 308 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 OR52L1Q8NGH7 329 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 BAP1Q92560 729 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 TMCO6Q96DC7 493 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 TTYH1Q9H313 450 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 PNPLA8Q9NP80 782 aa12.55□□□□□ -0.4
SRGAP3-202ENST00000383836 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 IRF1P10914 325 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RTP1P59025 263 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TGM3Q08188 693 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 ZC3H10Q96K80 434 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CBWD1Q9BRT8 395 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 MAN1C1Q9NR34 630 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 GGA3Q9NZ52 723 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 POU5F1Q01860 360 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CDH18Q13634 790 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 EFR3AQ14156 821 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 IER5Q5VY09 327 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RBM4BQ9BQ04 359 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RBM4Q9BWF3 364 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CISHQ9NSE2 258 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 EDF1O60869 148 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CYP2A7P20853 494 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 PIK3CGP48736 1102 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 HKDC1Q2TB90 917 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 SENP6Q9GZR1 1112 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 ITGAVP06756 1048 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CYP4B1P13584 511 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 NAMPTP43490 491 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TPTEP56180 551 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 S100A13Q99584 98 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 LNPEPQ9UIQ6 1025 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 OR14I1A6ND48 311 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CARTPTQ16568 116 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 GCNT7Q6ZNI0 430 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 FAM86B2P0C5J1 330 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 IDO1P14902 403 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CDYL2Q8N8U2 506 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RDH11Q8TC12 318 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 PIGBQ92521 554 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TBCBQ99426 244 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TBL1YQ9BQ87 522 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TDRD3Q9H7E2 651 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 CHST7Q9NS84 486 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 ARL8BQ9NVJ2 186 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 PNPT1Q8TCS8 783 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RAB2BQ8WUD1 216 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
SRGAP3-202ENST00000383836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 AXIN1O15169 862 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 RGS10O43665 173 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 ARHGDIBP52566 201 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 ZNF177Q13360 481 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 SWI5Q1ZZU3 235 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 ARMC8Q8IUR7 673 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 FAM129BQ96TA1 746 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
SRGAP3-202ENST00000383836 SEPT5Q99719 369 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms