RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 PPP1R10Q96QC0 940 aaKnown RBP14.08□□□□□ -0.16
NEK4-202ENST00000383721 COLEC11Q9BWP8 271 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 IL22Q9GZX6 179 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 BRD8Q9H0E9 1235 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
NEK4-202ENST00000383721 TCF7L2Q9NQB0 619 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 PDP2Q9P2J9 529 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
NEK4-202ENST00000383721 PDCD11Q14690 1871 aaKnown RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 GOLGA8QA0A0J9YX86 632 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 MYBPHLA2RUH7 354 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 GOLGA8OA6NCC3 632 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 GOLGA8NF8WBI6 632 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 TK2O00142 265 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 MTSS1O43312 755 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 JCHAINP01591 159 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 CCR10P46092 362 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 MSLNQ13421 630 aaPredicted RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 INTS6LQ5JSJ4 861 aaKnown RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 ITPRIPL1Q6GPH6 555 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 NECAB2Q7Z6G3 386 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 FAM35AQ86V20 835 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 PGAP3Q96FM1 320 aaPredicted RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 RTKNQ9BST9 563 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 C1QTNF1Q9BXJ1 281 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 ACE2Q9BYF1 805 aaPredicted RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 CCDC78A2IDD5 438 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 MATN2O00339 956 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 PEX2P28328 305 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 TLE2Q04725 743 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 BHLHA9Q7RTU4 235 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 EDEM1Q92611 657 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 PCED1BQ96HM7 432 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 SENP8Q96LD8 212 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 TRAPPC9Q96Q05 1148 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 GPR22Q99680 433 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 ILKAPQ9H0C8 392 aaPredicted RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 TASP1Q9H6P5 420 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 SPATS2LQ9NUQ6 558 aaKnown RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 OR12D3Q9UGF7 316 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 ATP11BQ9Y2G3 1177 aa14.07□□□□□ -0.16
NEK4-202ENST00000383721 TIMM13Q9Y5L4 95 aaPredicted RBP14.07□□□□□ -0.16
NEK4-202ENST00000383721 MEIS3P2A8K0S8 358 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 H3BNX3 289 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 H2AFYO75367 372 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 LRIG2O94898 1065 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 CTSHP09668 335 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 RAG1P15918 1043 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 SERPINB5P36952 375 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ANO4Q32M45 955 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 OTOP3Q7RTS5 596 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ZC3HC1Q86WB0 502 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 CNTD1Q8N815 330 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 GDPD5Q8WTR4 605 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 SREK1Q8WXA9 508 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 DRC3Q9H069 523 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 FAM163BP0C2L3 166 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 SAT1P21673 171 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 PIK3R1P27986 724 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 GABRB3P28472 473 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 GRIA4P48058 902 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ARL13BQ3SXY8 428 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 SLC30A9Q6PML9 568 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ZYG11AQ6WRX3 759 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ACAD11Q709F0 780 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEK4-202ENST00000383721 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 VAT1Q99536 393 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 KLHL4Q9C0H6 718 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 TKTL2Q9H0I9 626 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 PAPOLBQ9NRJ5 636 aaKnown RBP14.06□□□□□ -0.16
NEK4-202ENST00000383721 PACSIN3Q9UKS6 424 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 RAP2CQ9Y3L5 183 aa14.06□□□□□ -0.16
NEK4-202ENST00000383721 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 NEMP1O14524 444 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 HDAC3O15379 428 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 EPHA3P29320 983 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 SERPINB6P35237 376 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 THPOP40225 353 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 CXCR3P49682 368 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 AFF1P51825 1210 aaKnown RBP14.05□□□□□ -0.16
NEK4-202ENST00000383721 AQP4P55087 323 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 CDH17Q12864 832 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 PPP2R5DQ14738 602 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 LSM12Q3MHD2 195 aaKnown RBP14.05□□□□□ -0.16
NEK4-202ENST00000383721 ARL13AQ5H913 290 aaPredicted RBP14.05□□□□□ -0.16
NEK4-202ENST00000383721 PPM1LQ5SGD2 360 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 LIPMQ5VYY2 423 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 EPAS1Q99814 870 aa14.05□□□□□ -0.16
NEK4-202ENST00000383721 KIFC1Q9BW19 673 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms