RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 RPS21P63220 83 aaKnown RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 CCDC14Q49A88 953 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 C2CD6Q53TS8 623 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 MANEALQ5VSG8 457 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TRNP1Q6NT89 227 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 DHRS13Q6UX07 377 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 LINGO4Q6UY18 593 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 SPATS2Q86XZ4 545 aaKnown RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 EMC1Q8N766 993 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 GRIN3AQ8TCU5 1115 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 DMXL2Q8TDJ6 3036 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TSC1Q92574 1164 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 CENPIQ92674 756 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 ARHGEF26Q96DR7 871 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 FEM1CQ96JP0 617 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 C11orf70Q9BRQ4 267 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 EVA1BQ9NVM1 165 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 FANCLQ9NW38 375 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TMEM248Q9NWD8 314 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 LIMA1Q9UHB6 759 aaKnown RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 HS3ST3A1Q9Y663 406 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 PLXNA2O75051 1894 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TRABD2BA6NFA1 517 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 SLC31A1O15431 190 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 RAMP2O60895 175 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 THEGLP0DJG4 465 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 JUPP14923 745 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 CHRNB2P17787 502 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 CDK11BP21127 795 aaKnown RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 L1CAMP32004 1257 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ACADVLP49748 655 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 AIF1P55008 147 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 SNRPD1P62314 119 aaKnown RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ARF5P84085 180 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 STX1AQ16623 288 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 CDO1Q16878 200 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ZNF284Q2VY69 593 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 RWDD4Q6NW29 188 aaKnown RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 FBXL19Q6PCT2 694 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 CHST14Q8NCH0 376 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 C3orf20Q8ND61 904 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 CASKIN2Q8WXE0 1202 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ARRDC3Q96B67 414 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 ERGIC2Q96RQ1 377 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 WASF2Q9Y6W5 498 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 TMEM131Q92545 1883 aa13.23□□□□□ -0.29
RPAIN-202ENST00000381208 NYNRINQ9P2P1 1898 aaKnown RBP13.23□□□□□ -0.29
RPAIN-202ENST00000381208 NEMP2A6NFY4 417 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 SIGLEC16A6NMB1 481 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 A6NNZ2 444 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 TSPAN6O43657 245 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ZNF821O75541 412 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-202ENST00000381208 LRIG2O94898 1065 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 GSRP00390 522 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 PLEKP08567 350 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ALPPL2P10696 532 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ADRB3P13945 408 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 GPD1P21695 349 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ACP1P24666 158 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 DNA2P51530 1060 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-202ENST00000381208 E2F1Q01094 437 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 UBXN1Q04323 297 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 RAD51Q06609 339 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 BNIP3Q12983 259 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 CLEC16AQ2KHT3 1053 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ARTNQ5T4W7 220 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 KANSL1Q7Z3B3 1105 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ABI3BPQ7Z7G0 1075 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 SLC30A5Q8TAD4 765 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ASB12Q8WXK4 309 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ARHGEF2Q92974 986 aaKnown RBP13.22□□□□□ -0.29
RPAIN-202ENST00000381208 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 GPSM3Q9Y4H4 160 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 ARID1BQ8NFD5 2236 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-202ENST00000381208 SPEGQ15772 3267 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms