RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SNX7Q9UNH6 387 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 GSTK1Q9Y2Q3 226 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SNX24Q9Y343 169 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 NFASCO94856 1347 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AKAP6Q13023 2319 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 UBE2QL1A1L167 161 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF197O14709 1029 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TLL1O43897 1013 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AVPR1AP37288 418 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ITGA8P53708 1063 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 GRIK2Q13002 908 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CDH18Q13634 790 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 RFTN2Q52LD8 501 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FAAH2Q6GMR7 532 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CYB5R4Q7L1T6 521 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SLC22A15Q8IZD6 547 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 GPC2Q8N158 579 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ASB9Q96DX5 294 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PAFAH2Q99487 392 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ERVW-1Q9UQF0 538 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MYO16Q9Y6X6 1858 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 A0A1B0GVI7 797 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PTPN2P17706 415 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AMPD1P23109 780 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 OR1G1P47890 313 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AP1S2P56377 157 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PHKG1Q16816 387 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PABPC1LQ4VXU2 614 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 BTN2A1Q7KYR7 527 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SLFN11Q7Z7L1 901 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 METTL3Q86U44 580 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MICU2Q8IYU8 434 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 KIF2BQ8N4N8 673 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 DEDD2Q8WXF8 326 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF668Q96K58 619 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FOPNLQ96NB1 174 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SLITRK1Q96PX8 696 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 STRBPQ96SI9 672 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 KCNN2Q9H2S1 579 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 COPS7BQ9H9Q2 264 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TRMT13Q9NUP7 481 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MCUBQ9NWR8 336 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SMPD3Q9NY59 655 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 VAV3Q9UKW4 847 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AAR2Q9Y312 384 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FAM32AQ9Y421 112 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 RGSL1A5PLK6 1076 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SLC16A4O15374 487 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 GUCA1CO95843 209 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TYK2P29597 1187 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 RRM2P31350 389 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 HERVK_113P62684 666 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MGAT5Q09328 741 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ARHGEF7Q14155 803 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 NAA30Q147X3 362 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 UBE2TQ9NPD8 197 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 DOPEY2Q9Y3R5 2298 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CLIC2O15247 247 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 CALCAP01258 141 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 NR3C2P08235 984 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 TPSB2P20231 275 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 EFNA1P20827 205 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 DYNLT1P63172 113 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 LGALS3BPQ08380 585 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 BAATQ14032 418 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 BTG3Q14201 252 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 TPSAB1Q15661 275 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 PPP1R15BQ5SWA1 713 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF280DQ6N043 979 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 USP17L6PQ6QN14 398 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 KIF18BQ86Y91 864 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 HIPK1Q86Z02 1210 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 SLITRK4Q8IW52 837 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 CSGALNACT1Q8TDX6 532 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 EMILIN2Q9BXX0 1053 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 DCP1AQ9NPI6 582 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 RAD18Q9NS91 495 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 TRPM5Q9NZQ8 1165 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 AGAP1Q9UPQ3 857 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 WASH4PA8MWX3 477 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 APOC4-APOC2K7ER74 178 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 APOC2P02655 101 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 ENO1P06733 434 aaKnown RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 MYBP10242 640 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 DRAP1Q14919 205 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 CCDC85BQ15834 202 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 TRABD2AQ86V40 505 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 C10orf107Q8IVU9 208 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM199Q8N511 208 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 C7orf50Q9BRJ6 194 aaKnown RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 CDH9Q9ULB4 789 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 MSCO60682 206 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 F9P00740 461 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 PSMA1P25786 263 aaKnown RBP4.93□□□□□ -1.62
PTPRD-203ENST00000381196 PKLRP30613 574 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 ETFBP38117 255 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 PNPLA4P41247 253 aa4.93□□□□□ -1.62
PTPRD-203ENST00000381196 BRCC3P46736 316 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms