RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZNF23P17027 643 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ST13P50502 369 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CDK18Q07002 472 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 LGALS3BPQ08380 585 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FSTL1Q12841 308 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ATXN7L2Q5T6C5 722 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CHSY3Q70JA7 882 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 IFNL1Q8IU54 200 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CAMK1DQ8IU85 385 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PEX5LQ8IYB4 626 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ZCCHC9Q8N567 271 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 KCTD13Q8WZ19 329 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF514Q96K75 400 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CDH19Q9H159 772 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 NRDE2Q9H7Z3 1164 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CAPN10Q9HC96 672 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF229Q9UJW7 825 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FAM237AA0A1B0GTK4 181 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 SMIM31A0A1B0GVY4 71 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 KDM4FA0A1W2PPD8 638 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 VAPBO95292 243 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 NUDT14O95848 222 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GABRR2P28476 465 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PEX19P40855 299 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PFKPQ01813 784 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GRSF1Q12849 480 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 LRRC32Q14392 662 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TSNQ15631 228 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CCDC142Q17RM4 750 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 BBS12Q6ZW61 710 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FGD2Q7Z6J4 655 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 KIAA0319LQ8IZA0 1049 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ASZ1Q8WWH4 475 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ACBD6Q9BR61 282 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TMEM121Q9BTD3 319 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CDC42EP4Q9H3Q1 356 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 MTRRQ9UBK8 725 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 SLC9A8Q9Y2E8 581 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TPRKBQ9Y3C4 175 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 IPO13O94829 963 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FGRP09769 529 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ELFN1P0C7U0 828 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 RHOQP17081 205 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 NEK3P51956 506 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ERVK-21P61565 698 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FPGSQ05932 587 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TRAPPC12Q8WVT3 735 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ATXN2LQ8WWM7 1075 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 Q96MT0 163 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 SEMA3GQ9NS98 782 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 EXD2Q9NVH0 621 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PCDHGA4Q9Y5G9 962 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 OR10H2O60403 315 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 SERPINB7O75635 380 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 SERPINI2O75830 405 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 IL1BP01584 269 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 IFNA16P05015 189 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NDUFS1P28331 727 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 FLT3P36888 993 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 SARSP49591 514 aaKnown RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 PTGES3Q15185 160 aaKnown RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 PDE12Q6L8Q7 609 aaKnown RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 PACS1Q6VY07 963 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NEK10Q6ZWH5 1172 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 ATG16L2Q8NAA4 619 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 FNDC5Q8NAU1 212 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 BRSK1Q8TDC3 778 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 DNAJC9Q8WXX5 260 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 SHC3Q92529 594 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 ZIM3Q96PE6 472 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 MID1IP1Q9NPA3 183 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NCF1BA6NI72 391 aaPredicted RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NCF1CA8MVU1 366 aaPredicted RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 BTBD19C9JJ37 291 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 TAF4O00268 1085 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NR5A2O00482 541 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF185O15231 689 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 KRT34O76011 436 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 NCF1P14598 390 aaPredicted RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 CCNB1P14635 433 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 MYL12AP19105 171 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 HNMTP50135 292 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 ORC1Q13415 861 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 TOP3AQ13472 1001 aaPredicted RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 TAF13Q15543 124 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 GJC2Q5T442 439 aaPredicted RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 RAP1GAP2Q684P5 730 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 DOK6Q6PKX4 331 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 RFX8Q6ZV50 586 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 FAM71AQ8IYT1 594 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 METTL21AQ8WXB1 218 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 ZMAT2Q96NC0 199 aaKnown RBP7.24□□□□□ -1.25
CCDC171-201ENST00000380701 TBCDQ9BTW9 1192 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 HGH1Q9BTY7 390 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 MAGEH1Q9H213 219 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 C11orf49Q9H6J7 331 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 BLOC1S4Q9NUP1 217 aa7.24□□□□□ -1.25
CCDC171-201ENST00000380701 DZANK1Q9NVP4 752 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms