RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 HMCESQ96FZ2 354 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 VPS39Q96JC1 886 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 HTATIP2Q9BUP3 242 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 ATP13A1Q9HD20 1204 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 MTRRQ9UBK8 725 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 NYNRINQ9P2P1 1898 aaKnown RBP23.44■■□□□ 1.34
VPS16-201ENST00000380443 HGSO14964 777 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 CCDC22O60826 627 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 EFEMP2O95967 443 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 FGF3P11487 239 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 PTPN4P29074 926 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 CSRP3P50461 194 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 PRKAA2P54646 552 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 DUSP4Q13115 394 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 CTC1Q2NKJ3 1217 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 C16orf46Q6P387 395 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 RSPO2Q6UXX9 243 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.43■■□□□ 1.34
VPS16-201ENST00000380443 FBXO22Q8NEZ5 403 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 RDH11Q8TC12 318 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 PPP4R1Q8TF05 950 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 FAM167BQ9BTA0 163 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 IL1RAPL1Q9NZN1 696 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 TMEM216Q9P0N5 145 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 RPL26L1Q9UNX3 145 aaKnown RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 GREB1Q4ZG55 1949 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 A0A096LPK6 155 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 RAMP2O60895 175 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 PAPSS2O95340 614 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 CPA3P15088 417 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 TARSP26639 723 aaKnown RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 SLC8A1P32418 973 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 ALDH7A1P49419 539 aaKnown RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 WNT3AP56704 352 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 MLLT1Q03111 559 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 PCLAFQ15004 111 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 TBCCQ15814 346 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 ANKRD33Q7Z3H0 272 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 ZC3HC1Q86WB0 502 aaKnown RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 ARID3BQ8IVW6 561 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 ZNF419Q96HQ0 510 aaPredicted RBP23.43■■□□□ 1.34
VPS16-201ENST00000380443 NSL1Q96IY1 281 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 B3GALT6Q96L58 329 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 TSNARE1Q96NA8 513 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 TREX1Q9NSU2 369 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 ZNF212Q9UDV6 495 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 HAO1Q9UJM8 370 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 SORCS3Q9UPU3 1222 aa23.43■■□□□ 1.34
VPS16-201ENST00000380443 HEATR9A2RTY3 570 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 TLR5O60602 858 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 PMPCBO75439 489 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 ATP6V1G2O95670 118 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 TBX18O95935 607 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 SLC1A6P48664 564 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 LAMB3Q13751 1172 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 BTG3Q14201 252 aaPredicted RBP23.42■■□□□ 1.34
VPS16-201ENST00000380443 ALFQ53S48 1182 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 PPM1JQ5JR12 505 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 RAP1GAP2Q684P5 730 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 KLHDC10Q6PID8 442 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 KIAA0408Q6ZU52 694 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 MIB1Q86YT6 1006 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 GPR152Q8TDT2 470 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 ZNF599Q96NL3 588 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 CRISPLD1Q9H336 500 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 DNMT3LQ9UJW3 386 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 TLK1Q9UKI8 766 aa23.42■■□□□ 1.34
VPS16-201ENST00000380443 PRKCGP05129 697 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 C2P06681 752 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 KRT16P08779 473 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 SERPINB3P29508 390 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 ARCN1P48444 511 aaKnown RBP23.41■■□□□ 1.34
VPS16-201ENST00000380443 POU6F1Q14863 301 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 POLD3Q15054 466 aaPredicted RBP23.41■■□□□ 1.34
VPS16-201ENST00000380443 PIWIL2Q8TC59 973 aaKnown RBP23.41■■□□□ 1.34
VPS16-201ENST00000380443 CALML6Q8TD86 181 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 IGSF8Q969P0 613 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 AZIN2Q96A70 460 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 SLC7A6OSQ96CW6 309 aaPredicted RBP23.41■■□□□ 1.34
VPS16-201ENST00000380443 RPRD1AQ96P16 312 aaPredicted RBP23.41■■□□□ 1.34
VPS16-201ENST00000380443 HIPK3Q9H422 1215 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 TLE6Q9H808 572 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 CDY1Q9Y6F8 540 aa23.41■■□□□ 1.34
VPS16-201ENST00000380443 CCDC195A0A1B0GUA6 201 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 WFS1O76024 890 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 CNTN5O94779 1100 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 RALBP11234 206 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 CALB2P22676 271 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 ATP5C1P36542 298 aaKnown RBP23.4■■□□□ 1.34
VPS16-201ENST00000380443 PBX3P40426 434 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 SERINC3Q13530 473 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 THOC5Q13769 683 aaKnown RBP23.4■■□□□ 1.34
VPS16-201ENST00000380443 TFAP2DQ7Z6R9 452 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 OR6Y1Q8NGX8 325 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 TADA1Q96BN2 335 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 TOX2Q96NM4 488 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 NT5MQ9NPB1 228 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 TMEM114B3SHH9 223 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 SOAT2O75908 522 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 TOP3BO95985 862 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms