RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 RSAD1Q9HA92 442 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 PAK5Q9P286 719 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 TMEM221A6NGB7 291 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 LSM8O95777 96 aaKnown RBP14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 CCL5P13501 91 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 MPSTP25325 297 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 IRF9Q00978 393 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 CD300CQ08708 224 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 ARHGEF6Q15052 776 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 ZBTB6Q15916 424 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 PCDH19Q8TAB3 1148 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 SLC4A5Q9BY07 1137 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 UNKQ9C0B0 810 aaKnown RBP14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 KLC2Q9H0B6 622 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 DNAJC28Q9NX36 388 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 WBP1LQ9NX94 342 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 HCSTQ9UBK5 93 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 CEP290O15078 2479 aa14.08□□□□□ -0.16
SNCAIP-203ENST00000379538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 HSPA4LO95757 839 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 PSMC3P17980 439 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 TYK2P29597 1187 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 RXRGP48443 463 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 NDST1P52848 882 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 MAPK10P53779 464 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 SLC5A3P53794 718 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 CCL23P55773 120 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 BCAR1P56945 870 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 PRAMEP78395 509 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 SMYD1Q8NB12 490 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 C3orf58Q8NDZ4 430 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 LRTOMTQ8WZ04 291 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 RNF157Q96PX1 679 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 GMPR2Q9P2T1 348 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 ZNF26P17031 533 aaPredicted RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 TFE3P19532 575 aaPredicted RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 ATXN1P54253 815 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 NKX3-2P78367 333 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 CDK18Q07002 472 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 SURF1Q15526 300 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 TCTN1Q2MV58 587 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 PIGGQ5H8A4 983 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 C9orf57Q5W0N0 161 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 OGFOD2Q6N063 350 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 EPGNQ6UW88 154 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 PACS1Q6VY07 963 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 ACOT1Q86TX2 421 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 BBS5Q8N3I7 341 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 PCDH20Q8N6Y1 951 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 ACVR1CQ8NER5 493 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 RTKNQ9BST9 563 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 DHX35Q9H5Z1 703 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 MKS1Q9NXB0 559 aa14.07□□□□□ -0.16
SNCAIP-203ENST00000379538 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 B4GALT3O60512 393 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CKMT2P17540 419 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 HDCP19113 662 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CLCNKBP51801 687 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CDC42EP1Q00587 391 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 STILQ15468 1287 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 NXNQ6DKJ4 435 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 XKR5Q6UX68 686 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 BNC2Q6ZN30 1099 aaPredicted RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CLVS1Q8IUQ0 354 aaPredicted RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TMEM102Q8N9M5 508 aaPredicted RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 KYQ8NBH2 561 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 RXFP2Q8WXD0 754 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CIB1Q99828 191 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TCF7L2Q9NQB0 619 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 FAIMQ9NVQ4 179 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 MOCS1Q9NZB8 636 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 GNAO1P09471 354 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CPA3P15088 417 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 PDGFRAP16234 1089 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 RGS7P49802 495 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 GATMP50440 423 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 AP3M2P53677 418 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 RBP5P82980 135 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TAP1Q03518 808 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 GPNMBQ14956 572 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 SOWAHAQ2M3V2 549 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 LSM12Q3MHD2 195 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 KCNT2Q6UVM3 1135 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 CYP2R1Q6VVX0 501 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TMEM79Q9BSE2 394 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 SLC2A11Q9BYW1 496 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
SNCAIP-203ENST00000379538 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms