RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PHLDB2Q86SQ0 1253 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 MARCH9Q86YJ5 346 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 GALNT15Q8N3T1 639 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 KDM1BQ8NB78 822 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 SERAC1Q96JX3 654 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TLR10Q9BXR5 811 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 METTL5Q9NRN9 209 aaKnown RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 NYNRINQ9P2P1 1898 aaKnown RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 SLC25A13Q9UJS0 675 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TP53BP1Q12888 1972 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3DA0A087WVF3 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3IA0A087WXS9 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3EA0A087X179 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3KA0A087X1G2 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 FAM149AA5PLN7 773 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3FA6NER0 549 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 KCNU1A8MYU2 1149 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 MIF4GDA9UHW6 222 aaKnown RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3LB9A6J9 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TAF4O00268 1085 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 VILLO15195 856 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 DFNA5O60443 496 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 FTCDO95954 541 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3HP0C7X1 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 SLC2A3P11169 496 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 C5AR1P21730 350 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 MZF1P28698 734 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 CCR1P32246 355 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 RFC1P35251 1148 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 ADPRHP54922 357 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 NME3Q13232 169 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 ELAVL3Q14576 367 aaKnown RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TAF5Q15542 800 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TTC39BQ5VTQ0 682 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3GQ6DHY5 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3CQ6IPX1 549 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TBC1D3Q8IZP1 549 aaPredicted RBP14.07□□□□□ -0.16
PRPF18-202ENST00000378572 DEFB106AQ8N104 65 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 HES6Q96HZ4 224 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TRIM7Q9C029 511 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 GDF3Q9NR23 364 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 TOR4AQ9NXH8 423 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 HYOU1Q9Y4L1 999 aa14.07□□□□□ -0.16
PRPF18-202ENST00000378572 ANKRD11Q6UB99 2663 aaPredicted RBP14.06□□□□□ -0.16
PRPF18-202ENST00000378572 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 TCAF2A6NFQ2 919 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 C2CD4BA6NLJ0 364 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 ENC1O14682 589 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 PCDHGA12O60330 932 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 GJB6O95452 261 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 VAV1P15498 845 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 GOT1P17174 413 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 TCP1P17987 556 aaKnown RBP14.06□□□□□ -0.16
PRPF18-202ENST00000378572 COMTP21964 271 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 CD38P28907 300 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 GGCXP38435 758 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 SULT2A1Q06520 285 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 DHRS13Q6UX07 377 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.06□□□□□ -0.16
PRPF18-202ENST00000378572 TMPRSS7Q7RTY8 843 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 AADATQ8N5Z0 425 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 JOSD2Q8TAC2 188 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 OR8D1Q8WZ84 308 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 BTBD6Q96KE9 485 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 ELF4Q99607 663 aaPredicted RBP14.06□□□□□ -0.16
PRPF18-202ENST00000378572 GOLPH3Q9H4A6 298 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 VANGL2Q9ULK5 521 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 RAXQ9Y2V3 346 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 SAR1BQ9Y6B6 198 aa14.06□□□□□ -0.16
PRPF18-202ENST00000378572 KNL1Q8NG31 2342 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 A0A1B0GTQ1 180 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 HSF2BPO75031 334 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 HOXB3P14651 431 aaPredicted RBP14.05□□□□□ -0.16
PRPF18-202ENST00000378572 GPD1P21695 349 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 CTNNA2P26232 953 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 MAT2AP31153 395 aaKnown RBP14.05□□□□□ -0.16
PRPF18-202ENST00000378572 ARRB1P49407 418 aaPredicted RBP14.05□□□□□ -0.16
PRPF18-202ENST00000378572 OXCT1P55809 520 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 SLC12A1Q13621 1099 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 COL9A2Q14055 689 aaPredicted RBP14.05□□□□□ -0.16
PRPF18-202ENST00000378572 NCAPGQ9BPX3 1015 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 ORAI3Q9BRQ5 295 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 L2HGDHQ9H9P8 463 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 VPS28Q9UK41 221 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 PTPRBP23467 1997 aa14.05□□□□□ -0.16
PRPF18-202ENST00000378572 DSPP15924 2871 aaKnown RBP14.05□□□□□ -0.16
PRPF18-202ENST00000378572 DMXL2Q8TDJ6 3036 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CCDC66A2RUB6 948 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PLK4O00444 970 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CES2O00748 559 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 SPOPO43791 374 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms